Hb_000186_320

Information

Type -
Description -
Location Contig186: 363666-371243
Sequence    

Annotation

kegg
ID rcu:RCOM_0903580
description receptor protein kinase, putative (EC:2.7.10.2)
nr
ID XP_002518430.1
description receptor protein kinase, putative [Ricinus communis]
swissprot
ID A8R7E6
description Chitin elicitor receptor kinase 1 OS=Arabidopsis thaliana GN=CERK1 PE=1 SV=1
trembl
ID B9RXG1
description Receptor protein kinase, putative OS=Ricinus communis GN=RCOM_0903580 PE=3 SV=1
Gene Ontology
ID GO:0005622
description chitin elicitor receptor kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18256: 363839-368983 , PASA_asmbl_18257: 370434-370865
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000186_320 0.0 - - receptor protein kinase, putative [Ricinus communis]
2 Hb_001832_070 0.1212636993 - - PREDICTED: uncharacterized protein LOC105637887 [Jatropha curcas]
3 Hb_021576_160 0.1212969701 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
4 Hb_001221_050 0.1357618656 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
5 Hb_001610_070 0.1375921958 - - hypothetical protein MIMGU_mgv1a022867mg [Erythranthe guttata]
6 Hb_029622_090 0.1398916246 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
7 Hb_000028_330 0.1485805894 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
8 Hb_000047_010 0.1541116966 - - PREDICTED: expansin-like A1 [Jatropha curcas]
9 Hb_001189_150 0.1543312737 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 89-like [Jatropha curcas]
10 Hb_005946_200 0.1549075213 - - hypothetical protein POPTR_0006s16210g [Populus trichocarpa]
11 Hb_006153_020 0.1552910624 - - vacuolar invertase [Manihot esculenta]
12 Hb_001663_090 0.1556389059 - - ribonuclease t2, putative [Ricinus communis]
13 Hb_001518_030 0.1569696309 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
14 Hb_004109_110 0.1570915613 - - dioxygenase family protein [Populus trichocarpa]
15 Hb_011915_020 0.1578122893 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
16 Hb_003209_120 0.1587104131 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
17 Hb_002048_070 0.1588846457 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
18 Hb_002400_040 0.1599760344 - - PREDICTED: uncharacterized protein LOC105637633 [Jatropha curcas]
19 Hb_026048_030 0.1614807921 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000418_060 0.1663082993 - - PREDICTED: probable ribose-5-phosphate isomerase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000186_320 Hb_000186_320 Hb_001832_070 Hb_001832_070 Hb_000186_320--Hb_001832_070 Hb_021576_160 Hb_021576_160 Hb_000186_320--Hb_021576_160 Hb_001221_050 Hb_001221_050 Hb_000186_320--Hb_001221_050 Hb_001610_070 Hb_001610_070 Hb_000186_320--Hb_001610_070 Hb_029622_090 Hb_029622_090 Hb_000186_320--Hb_029622_090 Hb_000028_330 Hb_000028_330 Hb_000186_320--Hb_000028_330 Hb_001189_150 Hb_001189_150 Hb_001832_070--Hb_001189_150 Hb_000836_220 Hb_000836_220 Hb_001832_070--Hb_000836_220 Hb_096930_010 Hb_096930_010 Hb_001832_070--Hb_096930_010 Hb_001198_160 Hb_001198_160 Hb_001832_070--Hb_001198_160 Hb_001832_070--Hb_000028_330 Hb_003427_020 Hb_003427_020 Hb_021576_160--Hb_003427_020 Hb_021576_160--Hb_001221_050 Hb_006153_020 Hb_006153_020 Hb_021576_160--Hb_006153_020 Hb_001333_030 Hb_001333_030 Hb_021576_160--Hb_001333_030 Hb_005946_200 Hb_005946_200 Hb_021576_160--Hb_005946_200 Hb_021576_160--Hb_029622_090 Hb_001221_050--Hb_005946_200 Hb_001221_050--Hb_003427_020 Hb_001221_050--Hb_006153_020 Hb_002804_070 Hb_002804_070 Hb_001221_050--Hb_002804_070 Hb_001221_050--Hb_001333_030 Hb_001610_070--Hb_001198_160 Hb_001610_070--Hb_000028_330 Hb_011915_020 Hb_011915_020 Hb_001610_070--Hb_011915_020 Hb_006736_040 Hb_006736_040 Hb_001610_070--Hb_006736_040 Hb_024650_010 Hb_024650_010 Hb_001610_070--Hb_024650_010 Hb_001610_070--Hb_000836_220 Hb_001663_090 Hb_001663_090 Hb_029622_090--Hb_001663_090 Hb_029622_090--Hb_000028_330 Hb_002048_070 Hb_002048_070 Hb_029622_090--Hb_002048_070 Hb_029622_090--Hb_011915_020 Hb_004324_100 Hb_004324_100 Hb_029622_090--Hb_004324_100 Hb_000028_330--Hb_001198_160 Hb_000028_330--Hb_006736_040 Hb_001518_030 Hb_001518_030 Hb_000028_330--Hb_001518_030 Hb_026048_030 Hb_026048_030 Hb_000028_330--Hb_026048_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.74571 0.566735 0.850279 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0732729 0 0 0.0382543 0.121573

CAGE analysis