Hb_000045_100

Information

Type -
Description -
Location Contig45: 81691-82061
Sequence    

Annotation

kegg
ID rcu:RCOM_0611590
description hypothetical protein
nr
ID XP_002525615.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SHZ6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0611590 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000045_100 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_033273_010 0.00711062 - - -
3 Hb_000421_150 0.0129811205 - - Zinc finger protein GIS2 [Medicago truncatula]
4 Hb_007101_240 0.0141598868 - - conserved hypothetical protein [Ricinus communis]
5 Hb_010681_020 0.0151724751 - - JHL22C18.10 [Jatropha curcas]
6 Hb_000483_290 0.0154041629 - - PREDICTED: ankyrin-1-like [Prunus mume]
7 Hb_001950_050 0.0207989066 - - -
8 Hb_000552_040 0.0274997304 - - -
9 Hb_000345_520 0.0278582896 - - hypothetical protein POPTR_0013s02440g [Populus trichocarpa]
10 Hb_023280_020 0.029217658 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
11 Hb_000819_050 0.0322378917 - - hypothetical protein Csa_4G290160 [Cucumis sativus]
12 Hb_002281_030 0.0416987841 - - -
13 Hb_142461_010 0.0457376495 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
14 Hb_002792_040 0.0460947042 - - -
15 Hb_175976_020 0.0534980219 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
16 Hb_001424_050 0.0594448685 - - PREDICTED: zinc finger protein HD1-like isoform X2 [Jatropha curcas]
17 Hb_005656_020 0.0609220303 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
18 Hb_007455_010 0.0610427106 - - PREDICTED: uncharacterized protein LOC105800996 [Gossypium raimondii]
19 Hb_051677_010 0.0646823349 - - Uncharacterized protein TCM_017953 [Theobroma cacao]
20 Hb_002391_060 0.065476691 - - PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]

Gene co-expression network

sample Hb_000045_100 Hb_000045_100 Hb_033273_010 Hb_033273_010 Hb_000045_100--Hb_033273_010 Hb_000421_150 Hb_000421_150 Hb_000045_100--Hb_000421_150 Hb_007101_240 Hb_007101_240 Hb_000045_100--Hb_007101_240 Hb_010681_020 Hb_010681_020 Hb_000045_100--Hb_010681_020 Hb_000483_290 Hb_000483_290 Hb_000045_100--Hb_000483_290 Hb_001950_050 Hb_001950_050 Hb_000045_100--Hb_001950_050 Hb_033273_010--Hb_001950_050 Hb_033273_010--Hb_000421_150 Hb_000552_040 Hb_000552_040 Hb_033273_010--Hb_000552_040 Hb_033273_010--Hb_007101_240 Hb_033273_010--Hb_010681_020 Hb_000421_150--Hb_007101_240 Hb_000421_150--Hb_010681_020 Hb_000421_150--Hb_000483_290 Hb_000345_520 Hb_000345_520 Hb_000421_150--Hb_000345_520 Hb_023280_020 Hb_023280_020 Hb_000421_150--Hb_023280_020 Hb_007101_240--Hb_010681_020 Hb_007101_240--Hb_000483_290 Hb_007101_240--Hb_000345_520 Hb_007101_240--Hb_023280_020 Hb_010681_020--Hb_000483_290 Hb_010681_020--Hb_000345_520 Hb_010681_020--Hb_023280_020 Hb_000483_290--Hb_000345_520 Hb_000483_290--Hb_023280_020 Hb_001950_050--Hb_000552_040 Hb_002281_030 Hb_002281_030 Hb_001950_050--Hb_002281_030 Hb_002792_040 Hb_002792_040 Hb_001950_050--Hb_002792_040 Hb_001950_050--Hb_000421_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.664432 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.148503 0

CAGE analysis