Hb_000001_060

Information

Type -
Description -
Location Contig1: 94242-97304
Sequence    

Annotation

kegg
ID vvi:100252975
description N(6)-adenine-specific DNA methyltransferase 2
nr
ID XP_012090869.1
description PREDICTED: N(6)-adenine-specific DNA methyltransferase 2 [Jatropha curcas]
swissprot
ID Q9CY45
description Protein-lysine N-methyltransferase N6amt2 OS=Mus musculus GN=N6amt2 PE=2 SV=1
trembl
ID A0A067JDI1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03059 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000001_060 0.0 - - PREDICTED: N(6)-adenine-specific DNA methyltransferase 2 [Jatropha curcas]
2 Hb_004143_150 0.0509428472 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 24-like isoform X6 [Jatropha curcas]
3 Hb_004899_370 0.0520245895 - - hypothetical protein CICLE_v10009013mg [Citrus clementina]
4 Hb_001476_080 0.0547179986 - - PREDICTED: eukaryotic translation initiation factor 5A-like [Jatropha curcas]
5 Hb_003151_040 0.0551350671 transcription factor TF Family: Alfin-like zinc finger family protein [Populus trichocarpa]
6 Hb_000005_090 0.0704679227 - - hypothetical protein CICLE_v10029644mg [Citrus clementina]
7 Hb_001766_060 0.0722512171 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005846_040 0.0728888466 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Populus euphratica]
9 Hb_006059_050 0.07486967 - - PREDICTED: polyadenylate-binding protein 1 [Jatropha curcas]
10 Hb_000035_370 0.0768815982 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001123_130 0.0779657266 transcription factor TF Family: C3H nucleic acid binding protein, putative [Ricinus communis]
12 Hb_004108_070 0.0780744557 - - PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Jatropha curcas]
13 Hb_006615_240 0.0782942126 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
14 Hb_003787_010 0.0795931979 - - PREDICTED: 40S ribosomal protein S3-3-like [Phoenix dactylifera]
15 Hb_000920_110 0.0796392807 - - PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4 [Jatropha curcas]
16 Hb_000327_230 0.0799706364 - - PREDICTED: nitrilase-like protein 2 isoform X1 [Jatropha curcas]
17 Hb_000261_140 0.0803510888 - - -
18 Hb_000331_470 0.0804743375 - - PREDICTED: uncharacterized protein LOC105136689 [Populus euphratica]
19 Hb_000805_240 0.080643219 - - PREDICTED: uncharacterized protein C20orf24 homolog [Jatropha curcas]
20 Hb_000667_070 0.0809107312 - - PREDICTED: calmodulin-7 isoform X1 [Vitis vinifera]

Gene co-expression network

sample Hb_000001_060 Hb_000001_060 Hb_004143_150 Hb_004143_150 Hb_000001_060--Hb_004143_150 Hb_004899_370 Hb_004899_370 Hb_000001_060--Hb_004899_370 Hb_001476_080 Hb_001476_080 Hb_000001_060--Hb_001476_080 Hb_003151_040 Hb_003151_040 Hb_000001_060--Hb_003151_040 Hb_000005_090 Hb_000005_090 Hb_000001_060--Hb_000005_090 Hb_001766_060 Hb_001766_060 Hb_000001_060--Hb_001766_060 Hb_004143_150--Hb_004899_370 Hb_000920_110 Hb_000920_110 Hb_004143_150--Hb_000920_110 Hb_004127_020 Hb_004127_020 Hb_004143_150--Hb_004127_020 Hb_006615_240 Hb_006615_240 Hb_004143_150--Hb_006615_240 Hb_004102_110 Hb_004102_110 Hb_004143_150--Hb_004102_110 Hb_023278_020 Hb_023278_020 Hb_004899_370--Hb_023278_020 Hb_004899_370--Hb_003151_040 Hb_004899_370--Hb_004127_020 Hb_009615_070 Hb_009615_070 Hb_004899_370--Hb_009615_070 Hb_001616_040 Hb_001616_040 Hb_001476_080--Hb_001616_040 Hb_001476_080--Hb_004899_370 Hb_000996_140 Hb_000996_140 Hb_001476_080--Hb_000996_140 Hb_001863_430 Hb_001863_430 Hb_001476_080--Hb_001863_430 Hb_000035_370 Hb_000035_370 Hb_001476_080--Hb_000035_370 Hb_005846_040 Hb_005846_040 Hb_003151_040--Hb_005846_040 Hb_003151_040--Hb_001766_060 Hb_000373_070 Hb_000373_070 Hb_003151_040--Hb_000373_070 Hb_006059_050 Hb_006059_050 Hb_003151_040--Hb_006059_050 Hb_000152_500 Hb_000152_500 Hb_003151_040--Hb_000152_500 Hb_004108_070 Hb_004108_070 Hb_000005_090--Hb_004108_070 Hb_002105_100 Hb_002105_100 Hb_000005_090--Hb_002105_100 Hb_006693_020 Hb_006693_020 Hb_000005_090--Hb_006693_020 Hb_000005_090--Hb_004127_020 Hb_000005_090--Hb_004899_370 Hb_001245_100 Hb_001245_100 Hb_001766_060--Hb_001245_100 Hb_001766_060--Hb_005846_040 Hb_001246_110 Hb_001246_110 Hb_001766_060--Hb_001246_110 Hb_027380_050 Hb_027380_050 Hb_001766_060--Hb_027380_050 Hb_012019_010 Hb_012019_010 Hb_001766_060--Hb_012019_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.48975 5.88085 6.08708 6.89792 4.25974 6.25212
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.2651 15.3128 7.17887 4.29187 4.79175

CAGE analysis