Hb_000000_320

Information

Type -
Description -
Location Contig0: 555462-556946
Sequence    

Annotation

kegg
ID rcu:RCOM_1593610
description hypothetical protein
nr
ID XP_012071777.1
description PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
swissprot
ID Q9FJV7
description Calcium uniporter protein 4, mitochondrial OS=Arabidopsis thaliana GN=At5g42610 PE=2 SV=1
trembl
ID A0A067L2Y2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04389 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_320 0.0 - - PREDICTED: calcium uniporter protein 4, mitochondrial [Jatropha curcas]
2 Hb_001953_010 0.061896257 - - PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]
3 Hb_004112_070 0.0756911175 - - -
4 Hb_005111_020 0.0773262595 - - hypothetical protein CISIN_1g0417821mg, partial [Citrus sinensis]
5 Hb_001022_070 0.0785170639 - - cell wall invertase [Manihot esculenta]
6 Hb_003427_020 0.0934672709 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
7 Hb_004474_070 0.0972385683 desease resistance Gene Name: NB-ARC Disease resistance protein RPP8, putative [Ricinus communis]
8 Hb_002804_070 0.0979525511 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
9 Hb_000139_390 0.1006241653 - - -
10 Hb_001110_060 0.1058124717 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
11 Hb_009070_010 0.1059689023 - - Spermidine synthase, putative [Ricinus communis]
12 Hb_001856_130 0.1070736296 - - hypothetical protein CISIN_1g022795mg [Citrus sinensis]
13 Hb_000739_190 0.1077721123 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
14 Hb_000020_210 0.1080426436 - - hypothetical protein JCGZ_17348 [Jatropha curcas]
15 Hb_000120_560 0.1101423515 - - protein with unknown function [Ricinus communis]
16 Hb_002303_050 0.1110115318 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor PTL-like [Populus euphratica]
17 Hb_001408_080 0.1170493174 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
18 Hb_000120_600 0.1177787842 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
19 Hb_003023_030 0.1189449854 - - PREDICTED: MATE efflux family protein 5-like isoform X1 [Citrus sinensis]
20 Hb_001221_050 0.1207477562 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]

Gene co-expression network

sample Hb_000000_320 Hb_000000_320 Hb_001953_010 Hb_001953_010 Hb_000000_320--Hb_001953_010 Hb_004112_070 Hb_004112_070 Hb_000000_320--Hb_004112_070 Hb_005111_020 Hb_005111_020 Hb_000000_320--Hb_005111_020 Hb_001022_070 Hb_001022_070 Hb_000000_320--Hb_001022_070 Hb_003427_020 Hb_003427_020 Hb_000000_320--Hb_003427_020 Hb_004474_070 Hb_004474_070 Hb_000000_320--Hb_004474_070 Hb_001953_010--Hb_004474_070 Hb_002804_070 Hb_002804_070 Hb_001953_010--Hb_002804_070 Hb_002303_050 Hb_002303_050 Hb_001953_010--Hb_002303_050 Hb_001953_010--Hb_001022_070 Hb_128216_010 Hb_128216_010 Hb_001953_010--Hb_128216_010 Hb_000139_390 Hb_000139_390 Hb_004112_070--Hb_000139_390 Hb_004112_070--Hb_005111_020 Hb_000684_110 Hb_000684_110 Hb_004112_070--Hb_000684_110 Hb_001110_060 Hb_001110_060 Hb_004112_070--Hb_001110_060 Hb_004112_070--Hb_001022_070 Hb_005111_020--Hb_001110_060 Hb_000020_210 Hb_000020_210 Hb_005111_020--Hb_000020_210 Hb_001408_080 Hb_001408_080 Hb_005111_020--Hb_001408_080 Hb_001427_100 Hb_001427_100 Hb_005111_020--Hb_001427_100 Hb_122951_010 Hb_122951_010 Hb_005111_020--Hb_122951_010 Hb_001022_070--Hb_003427_020 Hb_001022_070--Hb_004474_070 Hb_001022_070--Hb_002303_050 Hb_005946_200 Hb_005946_200 Hb_001022_070--Hb_005946_200 Hb_001221_050 Hb_001221_050 Hb_003427_020--Hb_001221_050 Hb_021576_160 Hb_021576_160 Hb_003427_020--Hb_021576_160 Hb_003427_020--Hb_002804_070 Hb_003427_020--Hb_005946_200 Hb_004474_070--Hb_002303_050 Hb_004474_070--Hb_128216_010 Hb_001675_350 Hb_001675_350 Hb_004474_070--Hb_001675_350 Hb_004474_070--Hb_002804_070 Hb_004474_070--Hb_000139_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.66915 4.39925 11.0908 0 0.044391
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.118456 1.81829

CAGE analysis