Gene annotation
Transcriptome id Sobic.010G094600.1
Synonym Sb10g008240
Functional annotation zinc finger, C3HC4 type, domain containing protein, expressed
UniProt C5Z7E4
Pfam PF13639
Panther DB PTHR14155 PTHR14155:SF102
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT1G74410 : RING/U-box superfamily protein
RAP-DB (Rice) LOC_Os06g12560.1 : zinc finger, C3HC4 type, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a042609
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
2 Sobic.009G160200 prenylated rab acceptor, putative, expressed -
3 Sobic.003G052400 proline-rich family protein, putative, expressed -
4 Sobic.001G516100 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
5 Sobic.007G006600 expressed protein -
6 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
7 Sobic.002G348600 zinc finger family protein, putative, expressed -
8 Sobic.002G261900 arabinogalactan protein, putative, expressed -
9 Sobic.002G083266 - K00326: cytochrome-b5 reductase
10 Sobic.010G008100 RNA recognition motif containing protein, putative, expressed -
11 Sobic.010G188100 SNF7 domain containing protein, putative, expressed K12194: CHMP4, SNF7, charged multivesicular body protein 4
12 Sobic.002G362900 IBS1, putative, expressed -
13 Sobic.006G263100 expressed protein -
14 Sobic.001G103200 DNA binding protein, putative, expressed -
15 Sobic.009G240900 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
16 Sobic.002G363100 eukaryotic translation initiation factor 5A, putative, expressed K03263: translation initiation factor 5A
17 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
18 Sobic.003G392200 CXE carboxylesterase, putative, expressed -
19 Sobic.001G403700 mitochondrial carrier protein, putative, expressed K15113: SLC25A28_37, solute carrier family 25 (mitochondrial iron transporter), member 28/37
20 Sobic.009G001400 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5


Gene co-expression network
sample Sobic010G094600 Sobic010G094600 Sobic001G311100 Sobic001G311100 Sobic010G094600--Sobic001G311100 Sobic009G160200 Sobic009G160200 Sobic010G094600--Sobic009G160200 Sobic003G052400 Sobic003G052400 Sobic010G094600--Sobic003G052400 Sobic001G516100 Sobic001G516100 Sobic010G094600--Sobic001G516100 Sobic007G006600 Sobic007G006600 Sobic010G094600--Sobic007G006600 Sobic001G283500 Sobic001G283500 Sobic010G094600--Sobic001G283500 Sobic002G348600 Sobic002G348600 Sobic010G094600--Sobic002G348600 Sobic002G261900 Sobic002G261900 Sobic010G094600--Sobic002G261900 Sobic002G083266 Sobic002G083266 Sobic010G094600--Sobic002G083266 Sobic001G311100--Sobic002G261900 Sobic001G311100--Sobic010G094600 Sobic001G311100--Sobic009G160200 Sobic003G043400 Sobic003G043400 Sobic001G311100--Sobic003G043400 Sobic010G026700 Sobic010G026700 Sobic001G311100--Sobic010G026700 Sobic001G311100--Sobic001G283500 Sobic010G188100 Sobic010G188100 Sobic001G311100--Sobic010G188100 Sobic010G017000 Sobic010G017000 Sobic001G311100--Sobic010G017000 Sobic001G311100--Sobic002G083266 Sobic009G160200--Sobic001G283500 Sobic006G222400 Sobic006G222400 Sobic009G160200--Sobic006G222400 Sobic009G160200--Sobic001G311100 Sobic009G160200--Sobic010G017000 Sobic003G217100 Sobic003G217100 Sobic009G160200--Sobic003G217100 Sobic009G160200--Sobic002G261900 Sobic009G160200--Sobic010G094600 Sobic009G160200--Sobic003G043400 Sobic009G160200--Sobic003G052400 Sobic003G052400--Sobic010G017000 Sobic001G408100 Sobic001G408100 Sobic003G052400--Sobic001G408100 Sobic003G052400--Sobic002G348600 Sobic001G067900 Sobic001G067900 Sobic003G052400--Sobic001G067900 Sobic008G003600 Sobic008G003600 Sobic003G052400--Sobic008G003600 Sobic003G052400--Sobic003G217100 Sobic003G052400--Sobic009G160200 Sobic006G257001 Sobic006G257001 Sobic003G052400--Sobic006G257001 Sobic001G237500 Sobic001G237500 Sobic003G052400--Sobic001G237500 Sobic004G031600 Sobic004G031600 Sobic001G516100--Sobic004G031600 Sobic001G103200 Sobic001G103200 Sobic001G516100--Sobic001G103200 Sobic003G367300 Sobic003G367300 Sobic001G516100--Sobic003G367300 Sobic004G271700 Sobic004G271700 Sobic001G516100--Sobic004G271700 Sobic002G330300 Sobic002G330300 Sobic001G516100--Sobic002G330300 Sobic002G293300 Sobic002G293300 Sobic001G516100--Sobic002G293300 Sobic001G541100 Sobic001G541100 Sobic001G516100--Sobic001G541100 Sobic003G002400 Sobic003G002400 Sobic001G516100--Sobic003G002400 Sobic004G274400 Sobic004G274400 Sobic001G516100--Sobic004G274400 Sobic007G006600--Sobic003G367300 Sobic002G118600 Sobic002G118600 Sobic007G006600--Sobic002G118600 Sobic001G450700 Sobic001G450700 Sobic007G006600--Sobic001G450700 Sobic007G169200 Sobic007G169200 Sobic007G006600--Sobic007G169200 Sobic007G006600--Sobic002G293300 Sobic007G006600--Sobic002G330300 Sobic007G006600--Sobic010G094600 Sobic007G188100 Sobic007G188100 Sobic007G006600--Sobic007G188100 Sobic001G147200 Sobic001G147200 Sobic007G006600--Sobic001G147200 Sobic008G016900 Sobic008G016900 Sobic001G283500--Sobic008G016900 Sobic007G195701 Sobic007G195701 Sobic001G283500--Sobic007G195701 Sobic001G403700 Sobic001G403700 Sobic001G283500--Sobic001G403700 Sobic003G115800 Sobic003G115800 Sobic001G283500--Sobic003G115800 Sobic001G283500--Sobic009G160200 Sobic010G204300 Sobic010G204300 Sobic001G283500--Sobic010G204300 Sobic002G296300 Sobic002G296300 Sobic001G283500--Sobic002G296300 Sobic010G062800 Sobic010G062800 Sobic001G283500--Sobic010G062800 Sobic001G283500--Sobic010G188100 Sobic002G348600--Sobic003G052400 Sobic001G323000 Sobic001G323000 Sobic002G348600--Sobic001G323000 Sobic002G348600--Sobic009G160200 Sobic001G005600 Sobic001G005600 Sobic002G348600--Sobic001G005600 Sobic001G206900 Sobic001G206900 Sobic002G348600--Sobic001G206900 Sobic001G015800 Sobic001G015800 Sobic002G348600--Sobic001G015800 Sobic001G105500 Sobic001G105500 Sobic002G348600--Sobic001G105500 Sobic002G348600--Sobic010G094600 Sobic002G348600--Sobic001G311100 Sobic006G062800 Sobic006G062800 Sobic002G261900--Sobic006G062800 Sobic007G059900 Sobic007G059900 Sobic002G261900--Sobic007G059900 Sobic002G261900--Sobic002G083266 Sobic002G261900--Sobic001G311100 Sobic001G066700 Sobic001G066700 Sobic002G261900--Sobic001G066700 Sobic002G261900--Sobic003G043400 Sobic002G261900--Sobic010G204300 Sobic009G070200 Sobic009G070200 Sobic002G261900--Sobic009G070200 Sobic004G026200 Sobic004G026200 Sobic002G261900--Sobic004G026200 Sobic003G367451 Sobic003G367451 Sobic002G083266--Sobic003G367451 Sobic006G264300 Sobic006G264300 Sobic002G083266--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic002G083266--Sobic001G415000 Sobic009G111600 Sobic009G111600 Sobic002G083266--Sobic009G111600 Sobic001G224400 Sobic001G224400 Sobic002G083266--Sobic001G224400 Sobic002G083266--Sobic006G062800 Sobic002G083266--Sobic002G261900 Sobic010G213400 Sobic010G213400 Sobic002G083266--Sobic010G213400 Sobic004G272800 Sobic004G272800 Sobic002G083266--Sobic004G272800
Octagon: transcription factors


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