Gene annotation
Transcriptome id Sobic.010G022600.1
Synonym waxy gene, GBSSI, AF079258 , Sb10g002140, wx;graule-bound starch synthase
Functional annotation encodes granule-bound ADP-glucose-gluosyl transferase (PubMedID : 20585750)
- (PubMedID : 9866201)
starch synthase, putative, expressed
UniProt B3TQR9 , B3TS03 , B3TR12 , B3TQK2 , A5Y369 , B3TQS2 , A5Y381 , B3TQN1 , B3TQS9 , B3TQQ0 , B3TQM5 , B3TQP1 , B3TQQ4 , B3TRV9 , B3TQU2 , B3TR93 , A0A0U1T9X2 , B3TRP0 , B3TR98 , B3TRY5 , A5Y378 , B3TSB9 , A5Y362 , B3TQR3 , Q43136 , B3TS05 , B3TQM1 , B3TSK7 , B3TQP7 , B3TQQ2 , B3TQR7 , A5Y372 , B3TQM0 , B3TS15 , B3TR64 , B3TQS1 , B3TQT7 , B3TRS9 , B3TRY6 , B3TQS0 , B3TQL4 , B3TRW0 , B3TR22 , B3TQL1 , B3TRH4 , B3TQL8 , B3TR37 , A5Y374 , B3TR21 , B3TRQ6 , A5Y380 , B3TQQ9 , A5Y377 , B3TRX9 , A5Y363 , B3TQN6 , B3TRJ8 , B3TRZ7 , B3TR83 , A5Y366 , A5Y365 , B3TQX0 , Q5NKS5 , B3TRN6 , B3TR24 , B3TRU9 , B3TS60 , B3TR09 , B3TR74 , B3TSK5 , B3TR36 , B3TRS7 , B3TQP0 , B3TQJ3 , B3TS43 , B3TQU3 , B3TR11 , B3TRK4 , B3TRN9 , B3TRK3 , B3TQM2 , B3TR48 , B3TRZ8 , A0A0U1T8T5 , A5Y364 , Q43134
Pfam PF00534 PF08323
Panther DB PTHR12526 PTHR12526:SF383
NCBI CDD -
KEGG Orthology K13679; granule-bound starch synthase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32900 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os06g04200.1 : starch synthase, putative, expressed
MaizeGDB (Corn) Zm00025a050151
Brachypodium KQK19733
Barley HORVU7Hr1G012380.10 , HORVU7Hr1G012380.9 , HORVU7Hr1G012380.8 , HORVU7Hr1G012380.1 , HORVU7Hr1G012380.3 , HORVU7Hr1G012380.2 , HORVU7Hr1G012380.5 , HORVU7Hr1G012380.4 , HORVU7Hr1G012380.7 , HORVU7Hr1G012380.6
Wheat TraesCS7A02G070100 , TraesCS4A02G418200 , TraesCS7D02G064300
Populus -


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cDNA sequences
Sobic.010G022600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G226150 - -
2 Sobic.010G107300 - -
3 Sobic.002G417900 nucleotidyltransferase, putative, expressed -
4 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -
5 Sobic.001G362900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
6 Sobic.002G088000 cytokinin-N-glucosyltransferase 1, putative, expressed -
7 Sobic.005G083160 - -
8 Sobic.004G171500 basic helix-loop-helix, putative, expressed -
9 Sobic.001G297800 expressed protein -
10 Sobic.003G323000 - -
11 Sobic.009G116500 esterase, putative, expressed -
12 Sobic.005G188000 no apical meristem protein, putative, expressed -
13 Sobic.004G116200 expressed protein -
14 Sobic.003G156100 OsFBX117 - F-box domain containing protein, expressed -
15 Sobic.001G259300 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
16 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP
17 Sobic.008G064000 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.002G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@"BG2(Ortholog in rice:Xu et al., 2015)"(PubMedID : 31659863)@cytochrome P450, putative, expressed -
19 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -
20 Sobic.002G028100 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic010G022600 Sobic010G022600 Sobic005G226150 Sobic005G226150 Sobic010G022600--Sobic005G226150 Sobic010G107300 Sobic010G107300 Sobic010G022600--Sobic010G107300 Sobic002G417900 Sobic002G417900 Sobic010G022600--Sobic002G417900 Sobic004G085100 Sobic004G085100 Sobic010G022600--Sobic004G085100 Sobic001G362900 Sobic001G362900 Sobic010G022600--Sobic001G362900 Sobic002G088000 Sobic002G088000 Sobic010G022600--Sobic002G088000 Sobic005G083160 Sobic005G083160 Sobic010G022600--Sobic005G083160 Sobic004G171500 Sobic004G171500 Sobic010G022600--Sobic004G171500 Sobic001G297800 Sobic001G297800 Sobic010G022600--Sobic001G297800 Sobic003G247700 Sobic003G247700 Sobic005G226150--Sobic003G247700 Sobic007G070700 Sobic007G070700 Sobic005G226150--Sobic007G070700 Sobic009G245750 Sobic009G245750 Sobic005G226150--Sobic009G245750 Sobic001G253501 Sobic001G253501 Sobic005G226150--Sobic001G253501 Sobic008G103066 Sobic008G103066 Sobic005G226150--Sobic008G103066 Sobic008G088881 Sobic008G088881 Sobic005G226150--Sobic008G088881 Sobic009G001600 Sobic009G001600 Sobic005G226150--Sobic009G001600 Sobic005G174900 Sobic005G174900 Sobic005G226150--Sobic005G174900 Sobic007G025300 Sobic007G025300 Sobic005G226150--Sobic007G025300 Sobic010G107300--Sobic005G083160 Sobic010G107300--Sobic005G226150 Sobic010G107300--Sobic010G022600 Sobic010G107300--Sobic008G088881 Sobic002G360900 Sobic002G360900 Sobic010G107300--Sobic002G360900 Sobic001G233900 Sobic001G233900 Sobic010G107300--Sobic001G233900 Sobic010G107300--Sobic003G247700 Sobic003G323000 Sobic003G323000 Sobic010G107300--Sobic003G323000 Sobic010G107300--Sobic007G070700 Sobic002G417900--Sobic001G362900 Sobic002G417900--Sobic004G085100 Sobic009G116500 Sobic009G116500 Sobic002G417900--Sobic009G116500 Sobic002G417900--Sobic001G297800 Sobic003G156100 Sobic003G156100 Sobic002G417900--Sobic003G156100 Sobic002G417900--Sobic004G171500 Sobic002G089400 Sobic002G089400 Sobic002G417900--Sobic002G089400 Sobic008G176600 Sobic008G176600 Sobic002G417900--Sobic008G176600 Sobic002G417900--Sobic002G088000 Sobic004G085100--Sobic001G362900 Sobic004G085100--Sobic002G088000 Sobic004G085100--Sobic004G171500 Sobic004G116200 Sobic004G116200 Sobic004G085100--Sobic004G116200 Sobic004G085100--Sobic002G417900 Sobic008G001700 Sobic008G001700 Sobic004G085100--Sobic008G001700 Sobic008G071900 Sobic008G071900 Sobic004G085100--Sobic008G071900 Sobic005G188000 Sobic005G188000 Sobic004G085100--Sobic005G188000 Sobic004G085100--Sobic003G156100 Sobic001G362900--Sobic004G085100 Sobic001G362900--Sobic004G171500 Sobic001G362900--Sobic002G088000 Sobic001G362900--Sobic008G001700 Sobic001G362900--Sobic008G071900 Sobic001G362900--Sobic004G116200 Sobic001G362900--Sobic002G417900 Sobic001G362900--Sobic009G116500 Sobic001G362900--Sobic001G297800 Sobic002G088000--Sobic004G085100 Sobic002G088000--Sobic001G362900 Sobic002G088000--Sobic004G116200 Sobic002G088000--Sobic005G188000 Sobic002G088000--Sobic004G171500 Sobic002G088000--Sobic008G001700 Sobic003G350900 Sobic003G350900 Sobic002G088000--Sobic003G350900 Sobic002G088000--Sobic002G417900 Sobic002G088000--Sobic003G156100 Sobic005G083160--Sobic010G107300 Sobic005G083160--Sobic005G226150 Sobic005G083160--Sobic010G022600 Sobic005G083160--Sobic008G088881 Sobic009G218100 Sobic009G218100 Sobic005G083160--Sobic009G218100 Sobic005G083160--Sobic002G360900 Sobic005G083160--Sobic001G233900 Sobic003G101200 Sobic003G101200 Sobic005G083160--Sobic003G101200 Sobic005G083160--Sobic003G323000 Sobic004G171500--Sobic001G362900 Sobic004G171500--Sobic008G071900 Sobic004G171500--Sobic008G001700 Sobic004G171500--Sobic004G085100 Sobic004G171500--Sobic004G116200 Sobic010G102900 Sobic010G102900 Sobic004G171500--Sobic010G102900 Sobic004G171500--Sobic002G088000 Sobic004G171500--Sobic002G417900 Sobic004G171500--Sobic009G116500 Sobic002G367600 Sobic002G367600 Sobic001G297800--Sobic002G367600 Sobic001G535900 Sobic001G535900 Sobic001G297800--Sobic001G535900 Sobic002G028100 Sobic002G028100 Sobic001G297800--Sobic002G028100 Sobic002G211700 Sobic002G211700 Sobic001G297800--Sobic002G211700 Sobic001G297800--Sobic002G089400 Sobic001G297800--Sobic009G001600 Sobic001G297800--Sobic003G247700 Sobic001G297800--Sobic009G116500 Sobic006G018400 Sobic006G018400 Sobic001G297800--Sobic006G018400
Octagon: transcription factors


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