Gene annotation
Transcriptome id Sobic.004G085100.1
Synonym SHS1, EMB104, EMB42, ATBT1, Sb04g007010
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt C5XXW5
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF281
NCBI CDD KOG0752; Mitochondrial solute carrier protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32400 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os02g10800.2 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a019518
Brachypodium PNT66124
Barley -
Wheat TraesCS6B02G210000 , TraesCS6A02G175100 , TraesCS6D02G168200
Populus -


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cDNA sequences
Sobic.004G085100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G362900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
2 Sobic.002G088000 cytokinin-N-glucosyltransferase 1, putative, expressed -
3 Sobic.004G171500 basic helix-loop-helix, putative, expressed -
4 Sobic.004G116200 expressed protein -
5 Sobic.002G417900 nucleotidyltransferase, putative, expressed -
6 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
7 Sobic.008G071900 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08066: NFYC, nuclear transcription factor Y, gamma
8 Sobic.005G188000 no apical meristem protein, putative, expressed -
9 Sobic.003G156100 OsFBX117 - F-box domain containing protein, expressed -
10 Sobic.009G116500 esterase, putative, expressed -
11 Sobic.001G297800 expressed protein -
12 Sobic.008G176600 expressed protein -
13 Sobic.001G037800 cinnamoyl CoA reductase, putative, expressed -
14 Sobic.007G034900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
15 Sobic.008G064000 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.003G350900 homeobox domain containing protein, expressed -
17 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.010G102900 protein of unknown function DUF1675 domain containing protein, expressed -
19 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP
20 Sobic.002G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@"BG2(Ortholog in rice:Xu et al., 2015)"(PubMedID : 31659863)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic004G085100 Sobic004G085100 Sobic001G362900 Sobic001G362900 Sobic004G085100--Sobic001G362900 Sobic002G088000 Sobic002G088000 Sobic004G085100--Sobic002G088000 Sobic004G171500 Sobic004G171500 Sobic004G085100--Sobic004G171500 Sobic004G116200 Sobic004G116200 Sobic004G085100--Sobic004G116200 Sobic002G417900 Sobic002G417900 Sobic004G085100--Sobic002G417900 Sobic008G001700 Sobic008G001700 Sobic004G085100--Sobic008G001700 Sobic008G071900 Sobic008G071900 Sobic004G085100--Sobic008G071900 Sobic005G188000 Sobic005G188000 Sobic004G085100--Sobic005G188000 Sobic003G156100 Sobic003G156100 Sobic004G085100--Sobic003G156100 Sobic001G362900--Sobic004G085100 Sobic001G362900--Sobic004G171500 Sobic001G362900--Sobic002G088000 Sobic001G362900--Sobic008G001700 Sobic001G362900--Sobic008G071900 Sobic001G362900--Sobic004G116200 Sobic001G362900--Sobic002G417900 Sobic009G116500 Sobic009G116500 Sobic001G362900--Sobic009G116500 Sobic001G297800 Sobic001G297800 Sobic001G362900--Sobic001G297800 Sobic002G088000--Sobic004G085100 Sobic002G088000--Sobic001G362900 Sobic002G088000--Sobic004G116200 Sobic002G088000--Sobic005G188000 Sobic002G088000--Sobic004G171500 Sobic002G088000--Sobic008G001700 Sobic003G350900 Sobic003G350900 Sobic002G088000--Sobic003G350900 Sobic002G088000--Sobic002G417900 Sobic002G088000--Sobic003G156100 Sobic004G171500--Sobic001G362900 Sobic004G171500--Sobic008G071900 Sobic004G171500--Sobic008G001700 Sobic004G171500--Sobic004G085100 Sobic004G171500--Sobic004G116200 Sobic010G102900 Sobic010G102900 Sobic004G171500--Sobic010G102900 Sobic004G171500--Sobic002G088000 Sobic004G171500--Sobic002G417900 Sobic004G171500--Sobic009G116500 Sobic004G116200--Sobic002G088000 Sobic004G116200--Sobic008G001700 Sobic004G116200--Sobic001G362900 Sobic004G116200--Sobic004G085100 Sobic004G116200--Sobic004G171500 Sobic004G116200--Sobic005G188000 Sobic009G086800 Sobic009G086800 Sobic004G116200--Sobic009G086800 Sobic004G116200--Sobic008G071900 Sobic004G116200--Sobic003G350900 Sobic002G417900--Sobic001G362900 Sobic002G417900--Sobic004G085100 Sobic002G417900--Sobic009G116500 Sobic002G417900--Sobic001G297800 Sobic002G417900--Sobic003G156100 Sobic002G417900--Sobic004G171500 Sobic002G089400 Sobic002G089400 Sobic002G417900--Sobic002G089400 Sobic008G176600 Sobic008G176600 Sobic002G417900--Sobic008G176600 Sobic002G417900--Sobic002G088000 Sobic008G001700--Sobic004G171500 Sobic008G001700--Sobic008G071900 Sobic008G001700--Sobic001G362900 Sobic008G001700--Sobic004G116200 Sobic009G021300 Sobic009G021300 Sobic008G001700--Sobic009G021300 Sobic008G001700--Sobic004G085100 Sobic008G001700--Sobic010G102900 Sobic007G147300 Sobic007G147300 Sobic008G001700--Sobic007G147300 Sobic008G001700--Sobic002G088000 Sobic008G071900--Sobic010G102900 Sobic008G071900--Sobic004G171500 Sobic008G071900--Sobic008G001700 Sobic003G227800 Sobic003G227800 Sobic008G071900--Sobic003G227800 Sobic008G071900--Sobic001G362900 Sobic001G142600 Sobic001G142600 Sobic008G071900--Sobic001G142600 Sobic008G071900--Sobic009G021300 Sobic008G071900--Sobic004G085100 Sobic005G001500 Sobic005G001500 Sobic008G071900--Sobic005G001500 Sobic005G188000--Sobic003G350900 Sobic005G188000--Sobic002G088000 Sobic008G064000 Sobic008G064000 Sobic005G188000--Sobic008G064000 Sobic005G188000--Sobic003G156100 Sobic005G188000--Sobic004G085100 Sobic005G188000--Sobic004G116200 Sobic001G259300 Sobic001G259300 Sobic005G188000--Sobic001G259300 Sobic007G083300 Sobic007G083300 Sobic005G188000--Sobic007G083300 Sobic005G188000--Sobic001G362900 Sobic003G156100--Sobic008G064000 Sobic003G156100--Sobic001G297800 Sobic006G018400 Sobic006G018400 Sobic003G156100--Sobic006G018400 Sobic001G535900 Sobic001G535900 Sobic003G156100--Sobic001G535900 Sobic002G211700 Sobic002G211700 Sobic003G156100--Sobic002G211700 Sobic003G156100--Sobic007G083300 Sobic003G247700 Sobic003G247700 Sobic003G156100--Sobic003G247700 Sobic002G367600 Sobic002G367600 Sobic003G156100--Sobic002G367600 Sobic003G156100--Sobic005G188000
Octagon: transcription factors


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