Gene annotation
Transcriptome id Sobic.008G064000.2
Synonym Sb08g005360
Functional annotation LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1Z5R509
Pfam PF14368
Panther DB PTHR33286 PTHR33286:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G30880 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g25350.1 : LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a025680
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G064000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G034900 expressed protein -
2 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -
3 Sobic.003G156100 OsFBX117 - F-box domain containing protein, expressed -
4 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
5 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
6 Sobic.K043500 MYB family transcription factor, putative, expressed -
7 Sobic.002G211700 storage protein(PubMedID : 16668596)@"kafirin seed storage protein, delta-kafirin precursor"(PubMedID : 21853065)@PROLM23 - Prolamin precursor, expressed -
8 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP
9 Sobic.005G188000 no apical meristem protein, putative, expressed -
10 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G350900 homeobox domain containing protein, expressed -
12 Sobic.001G297800 expressed protein -
13 Sobic.009G001600 "kafirin seed storage protein, similar to Beta-kafirin precursor"(PubMedID : 21853065)@PROLM24 - Prolamin precursor, expressed -
14 Sobic.005G174900 - -
15 Sobic.006G018400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@protein phosphatase 2C, putative, expressed K14497: protein phosphatase 2C
16 Sobic.009G186400 SSA1 - 2S albumin seed storage family protein precursor, expressed -
17 Sobic.006G062700 transferase family protein, putative, expressed -
18 Sobic.001G249233 - -
19 Sobic.003G024700 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.008G103066 - -


Gene co-expression network
sample Sobic008G064000 Sobic008G064000 Sobic010G034900 Sobic010G034900 Sobic008G064000--Sobic010G034900 Sobic007G083300 Sobic007G083300 Sobic008G064000--Sobic007G083300 Sobic003G156100 Sobic003G156100 Sobic008G064000--Sobic003G156100 Sobic007G070700 Sobic007G070700 Sobic008G064000--Sobic007G070700 Sobic003G247700 Sobic003G247700 Sobic008G064000--Sobic003G247700 SobicK043500 SobicK043500 Sobic008G064000--SobicK043500 Sobic002G211700 Sobic002G211700 Sobic008G064000--Sobic002G211700 Sobic001G535900 Sobic001G535900 Sobic008G064000--Sobic001G535900 Sobic005G188000 Sobic005G188000 Sobic008G064000--Sobic005G188000 Sobic010G034900--Sobic008G064000 Sobic003G024700 Sobic003G024700 Sobic010G034900--Sobic003G024700 Sobic001G249233 Sobic001G249233 Sobic010G034900--Sobic001G249233 Sobic010G219300 Sobic010G219300 Sobic010G034900--Sobic010G219300 Sobic005G174900 Sobic005G174900 Sobic010G034900--Sobic005G174900 Sobic006G062700 Sobic006G062700 Sobic010G034900--Sobic006G062700 Sobic010G148600 Sobic010G148600 Sobic010G034900--Sobic010G148600 Sobic010G109700 Sobic010G109700 Sobic010G034900--Sobic010G109700 Sobic010G034900--Sobic007G083300 Sobic007G083300--Sobic007G070700 Sobic002G077600 Sobic002G077600 Sobic007G083300--Sobic002G077600 Sobic007G083300--Sobic003G247700 Sobic007G083300--SobicK043500 Sobic007G083300--Sobic002G211700 Sobic001G253501 Sobic001G253501 Sobic007G083300--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic007G083300--Sobic009G245750 Sobic009G001600 Sobic009G001600 Sobic007G083300--Sobic009G001600 Sobic007G083300--Sobic001G535900 Sobic003G156100--Sobic008G064000 Sobic001G297800 Sobic001G297800 Sobic003G156100--Sobic001G297800 Sobic006G018400 Sobic006G018400 Sobic003G156100--Sobic006G018400 Sobic003G156100--Sobic001G535900 Sobic003G156100--Sobic002G211700 Sobic003G156100--Sobic007G083300 Sobic003G156100--Sobic003G247700 Sobic002G367600 Sobic002G367600 Sobic003G156100--Sobic002G367600 Sobic003G156100--Sobic005G188000 Sobic007G070700--Sobic002G077600 Sobic007G070700--Sobic007G083300 Sobic007G070700--Sobic003G247700 Sobic007G070700--Sobic001G253501 Sobic007G070700--Sobic009G245750 Sobic007G070700--Sobic002G211700 Sobic007G070700--Sobic009G001600 Sobic001G112250 Sobic001G112250 Sobic007G070700--Sobic001G112250 Sobic007G070700--SobicK043500 Sobic003G247700--Sobic002G211700 Sobic003G247700--Sobic009G001600 Sobic003G247700--Sobic001G535900 Sobic003G247700--Sobic007G070700 Sobic003G247700--Sobic009G245750 Sobic003G247700--Sobic001G253501 Sobic003G247700--Sobic002G077600 Sobic003G247700--Sobic007G083300 Sobic008G103066 Sobic008G103066 Sobic003G247700--Sobic008G103066 SobicK043500--Sobic007G083300 SobicK043500--Sobic007G070700 Sobic009G186400 Sobic009G186400 SobicK043500--Sobic009G186400 SobicK043500--Sobic002G077600 SobicK043500--Sobic003G247700 Sobic002G077500 Sobic002G077500 SobicK043500--Sobic002G077500 Sobic007G049400 Sobic007G049400 SobicK043500--Sobic007G049400 SobicK043500--Sobic002G211700 SobicK043500--Sobic001G253501 Sobic002G211700--Sobic001G535900 Sobic002G211700--Sobic009G001600 Sobic002G211700--Sobic003G247700 Sobic002G211700--Sobic002G367600 Sobic002G211700--Sobic009G245750 Sobic002G211700--Sobic001G253501 Sobic002G211700--Sobic007G070700 Sobic002G211700--Sobic002G077600 Sobic002G211700--Sobic001G297800 Sobic001G535900--Sobic002G211700 Sobic001G535900--Sobic009G001600 Sobic001G535900--Sobic002G367600 Sobic001G535900--Sobic003G247700 Sobic001G535900--Sobic001G297800 Sobic002G028100 Sobic002G028100 Sobic001G535900--Sobic002G028100 Sobic001G535900--Sobic008G103066 Sobic001G535900--Sobic009G245750 Sobic001G535900--Sobic001G253501 Sobic003G350900 Sobic003G350900 Sobic005G188000--Sobic003G350900 Sobic002G088000 Sobic002G088000 Sobic005G188000--Sobic002G088000 Sobic005G188000--Sobic008G064000 Sobic005G188000--Sobic003G156100 Sobic004G085100 Sobic004G085100 Sobic005G188000--Sobic004G085100 Sobic004G116200 Sobic004G116200 Sobic005G188000--Sobic004G116200 Sobic001G259300 Sobic001G259300 Sobic005G188000--Sobic001G259300 Sobic005G188000--Sobic007G083300 Sobic001G362900 Sobic001G362900 Sobic005G188000--Sobic001G362900
Octagon: transcription factors


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