Gene annotation
Transcriptome id Sobic.010G034900.1
Synonym
Functional annotation expressed protein
UniProt A0A194YH32
Pfam -
Panther DB PTHR33474 PTHR33474:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.010G034900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G064000 LTPL36 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.003G024700 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.001G249233 - -
4 Sobic.010G219300 DEFL27 - Defensin and Defensin-like DEFL family -
5 Sobic.005G174900 - -
6 Sobic.006G062700 transferase family protein, putative, expressed -
7 Sobic.010G148600 WRKY31, expressed -
8 Sobic.010G109700 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
9 Sobic.007G083300 paired amphipathic helix repeat-containing protein, putative, expressed -
10 Sobic.003G156100 OsFBX117 - F-box domain containing protein, expressed -
11 Sobic.005G140400 - -
12 Sobic.007G070700 OsFBX265 - F-box domain containing protein, expressed -
13 Sobic.007G025300 helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.005G056100 - -
15 Sobic.003G247700 cold acclimation protein WCOR413, putative, expressed -
16 Sobic.K043500 MYB family transcription factor, putative, expressed -
17 Sobic.002G211700 storage protein(PubMedID : 16668596)@"kafirin seed storage protein, delta-kafirin precursor"(PubMedID : 21853065)@PROLM23 - Prolamin precursor, expressed -
18 Sobic.002G077600 LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.001G096500 phosphoesterase, putative, expressed K08073: bifunctional polynucleotide phosphatase/kinase
20 Sobic.001G535900 aquaporin protein, putative, expressed K09873: aquaporin TIP


Gene co-expression network
sample Sobic010G034900 Sobic010G034900 Sobic008G064000 Sobic008G064000 Sobic010G034900--Sobic008G064000 Sobic003G024700 Sobic003G024700 Sobic010G034900--Sobic003G024700 Sobic001G249233 Sobic001G249233 Sobic010G034900--Sobic001G249233 Sobic010G219300 Sobic010G219300 Sobic010G034900--Sobic010G219300 Sobic005G174900 Sobic005G174900 Sobic010G034900--Sobic005G174900 Sobic006G062700 Sobic006G062700 Sobic010G034900--Sobic006G062700 Sobic010G148600 Sobic010G148600 Sobic010G034900--Sobic010G148600 Sobic010G109700 Sobic010G109700 Sobic010G034900--Sobic010G109700 Sobic007G083300 Sobic007G083300 Sobic010G034900--Sobic007G083300 Sobic008G064000--Sobic010G034900 Sobic008G064000--Sobic007G083300 Sobic003G156100 Sobic003G156100 Sobic008G064000--Sobic003G156100 Sobic007G070700 Sobic007G070700 Sobic008G064000--Sobic007G070700 Sobic003G247700 Sobic003G247700 Sobic008G064000--Sobic003G247700 SobicK043500 SobicK043500 Sobic008G064000--SobicK043500 Sobic002G211700 Sobic002G211700 Sobic008G064000--Sobic002G211700 Sobic001G535900 Sobic001G535900 Sobic008G064000--Sobic001G535900 Sobic005G188000 Sobic005G188000 Sobic008G064000--Sobic005G188000 Sobic003G024700--Sobic010G219300 Sobic003G024700--Sobic010G034900 Sobic003G024700--Sobic010G148600 Sobic003G024700--Sobic001G249233 Sobic003G024700--Sobic005G174900 Sobic003G024700--Sobic006G062700 Sobic005G140400 Sobic005G140400 Sobic003G024700--Sobic005G140400 Sobic001G096500 Sobic001G096500 Sobic003G024700--Sobic001G096500 Sobic003G024700--Sobic010G109700 Sobic001G249233--Sobic005G174900 Sobic001G249233--Sobic006G062700 Sobic001G249233--Sobic010G148600 Sobic001G249233--Sobic005G140400 Sobic001G249233--Sobic010G109700 Sobic007G025300 Sobic007G025300 Sobic001G249233--Sobic007G025300 Sobic001G249233--Sobic003G024700 Sobic005G056100 Sobic005G056100 Sobic001G249233--Sobic005G056100 Sobic008G103066 Sobic008G103066 Sobic001G249233--Sobic008G103066 Sobic010G219300--Sobic003G024700 Sobic005G187100 Sobic005G187100 Sobic010G219300--Sobic005G187100 Sobic010G219300--Sobic010G034900 Sobic007G082900 Sobic007G082900 Sobic010G219300--Sobic007G082900 Sobic005G153600 Sobic005G153600 Sobic010G219300--Sobic005G153600 Sobic005G225000 Sobic005G225000 Sobic010G219300--Sobic005G225000 Sobic010G219300--Sobic010G148600 Sobic010G219300--Sobic001G096500 Sobic005G199101 Sobic005G199101 Sobic010G219300--Sobic005G199101 Sobic005G174900--Sobic001G249233 Sobic005G174900--Sobic006G062700 Sobic005G174900--Sobic005G140400 Sobic005G174900--Sobic007G025300 Sobic005G174900--Sobic008G103066 Sobic005G174900--Sobic010G148600 Sobic001G253501 Sobic001G253501 Sobic005G174900--Sobic001G253501 Sobic009G245750 Sobic009G245750 Sobic005G174900--Sobic009G245750 Sobic005G174900--Sobic007G070700 Sobic006G062700--Sobic005G174900 Sobic006G062700--Sobic001G249233 Sobic006G062700--Sobic008G103066 Sobic006G062700--Sobic007G025300 Sobic006G062700--Sobic005G140400 Sobic006G062700--Sobic010G148600 Sobic001G112250 Sobic001G112250 Sobic006G062700--Sobic001G112250 Sobic006G062700--Sobic007G070700 Sobic006G062700--Sobic010G109700 Sobic010G148600--Sobic005G140400 Sobic010G148600--Sobic001G249233 Sobic010G148600--Sobic005G174900 Sobic002G091800 Sobic002G091800 Sobic010G148600--Sobic002G091800 Sobic010G148600--Sobic005G225000 Sobic010G148600--Sobic003G024700 Sobic010G148600--Sobic006G062700 Sobic010G148600--Sobic005G199101 Sobic010G153800 Sobic010G153800 Sobic010G148600--Sobic010G153800 Sobic010G109700--Sobic005G056100 Sobic010G109700--Sobic001G096500 Sobic010G109700--Sobic001G249233 Sobic008G081000 Sobic008G081000 Sobic010G109700--Sobic008G081000 Sobic005G102451 Sobic005G102451 Sobic010G109700--Sobic005G102451 Sobic010G109700--Sobic006G062700 Sobic010G109700--Sobic005G174900 Sobic010G109700--Sobic007G025300 Sobic008G088450 Sobic008G088450 Sobic010G109700--Sobic008G088450 Sobic007G083300--Sobic007G070700 Sobic002G077600 Sobic002G077600 Sobic007G083300--Sobic002G077600 Sobic007G083300--Sobic003G247700 Sobic007G083300--SobicK043500 Sobic007G083300--Sobic002G211700 Sobic007G083300--Sobic001G253501 Sobic007G083300--Sobic009G245750 Sobic009G001600 Sobic009G001600 Sobic007G083300--Sobic009G001600 Sobic007G083300--Sobic001G535900
Octagon: transcription factors


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