Gene annotation
Transcriptome id Sobic.008G013200.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PBJ9
Pfam -
Panther DB PTHR34567 PTHR34567:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03990 : -
RAP-DB (Rice) LOC_Os11g04510.1 : expressed protein
MaizeGDB (Corn) Zm00025a033432
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
2 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
3 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
4 Sobic.005G201200 - -
5 Sobic.002G066700 OsFBL33 - F-box domain and LRR containing protein, expressed -
6 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
7 Sobic.002G158300 ankyrin, putative, expressed -
8 Sobic.004G328100 expressed protein -
9 Sobic.006G038700 - -
10 Sobic.009G186700 TraB family protein, putative, expressed -
11 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
12 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
13 Sobic.009G056900 acetyltransferase, GNAT family protein, expressed -
14 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
15 Sobic.002G147400 homeodomain-related, putative, expressed -
16 Sobic.002G014032 - -
17 Sobic.004G064800 haemolysin-III, putative, expressed K07297: adiponectin receptor
18 Sobic.006G100266 - -
19 Sobic.008G105600 - -
20 Sobic.005G206800 expressed protein -


Gene co-expression network
sample Sobic008G013200 Sobic008G013200 Sobic003G308300 Sobic003G308300 Sobic008G013200--Sobic003G308300 Sobic002G016000 Sobic002G016000 Sobic008G013200--Sobic002G016000 Sobic003G255700 Sobic003G255700 Sobic008G013200--Sobic003G255700 Sobic005G201200 Sobic005G201200 Sobic008G013200--Sobic005G201200 Sobic002G066700 Sobic002G066700 Sobic008G013200--Sobic002G066700 Sobic002G304500 Sobic002G304500 Sobic008G013200--Sobic002G304500 Sobic002G158300 Sobic002G158300 Sobic008G013200--Sobic002G158300 Sobic004G328100 Sobic004G328100 Sobic008G013200--Sobic004G328100 Sobic006G038700 Sobic006G038700 Sobic008G013200--Sobic006G038700 Sobic003G308300--Sobic003G255700 Sobic003G308300--Sobic008G013200 Sobic009G186700 Sobic009G186700 Sobic003G308300--Sobic009G186700 Sobic007G148400 Sobic007G148400 Sobic003G308300--Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic003G308300--Sobic007G218600 Sobic001G305900 Sobic001G305900 Sobic003G308300--Sobic001G305900 Sobic003G308300--Sobic004G328100 Sobic006G100266 Sobic006G100266 Sobic003G308300--Sobic006G100266 Sobic003G270100 Sobic003G270100 Sobic003G308300--Sobic003G270100 Sobic002G016000--Sobic005G201200 Sobic002G016000--Sobic006G038700 Sobic008G041300 Sobic008G041300 Sobic002G016000--Sobic008G041300 Sobic010G255400 Sobic010G255400 Sobic002G016000--Sobic010G255400 Sobic008G007800 Sobic008G007800 Sobic002G016000--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic002G016000--Sobic002G361500 Sobic001G117701 Sobic001G117701 Sobic002G016000--Sobic001G117701 Sobic004G064800 Sobic004G064800 Sobic002G016000--Sobic004G064800 Sobic009G006700 Sobic009G006700 Sobic002G016000--Sobic009G006700 Sobic003G255700--Sobic006G100266 Sobic003G255700--Sobic003G308300 Sobic003G255700--Sobic009G186700 Sobic003G255700--Sobic002G066700 Sobic003G255700--Sobic001G305900 Sobic003G255700--Sobic008G013200 Sobic003G255700--Sobic002G016000 Sobic001G050500 Sobic001G050500 Sobic003G255700--Sobic001G050500 Sobic003G255700--Sobic005G201200 Sobic005G201200--Sobic002G016000 Sobic005G201200--Sobic008G007800 Sobic005G201200--Sobic006G038700 Sobic005G201200--Sobic004G064800 Sobic005G201200--Sobic009G006700 Sobic005G201200--Sobic010G255400 Sobic005G201200--Sobic002G066700 Sobic005G201200--Sobic002G304500 Sobic002G147400 Sobic002G147400 Sobic005G201200--Sobic002G147400 Sobic009G056900 Sobic009G056900 Sobic002G066700--Sobic009G056900 Sobic002G066700--Sobic002G147400 Sobic001G392700 Sobic001G392700 Sobic002G066700--Sobic001G392700 Sobic002G066700--Sobic005G201200 Sobic007G086701 Sobic007G086701 Sobic002G066700--Sobic007G086701 Sobic002G066700--Sobic006G038700 Sobic001G264600 Sobic001G264600 Sobic002G066700--Sobic001G264600 Sobic005G206800 Sobic005G206800 Sobic002G066700--Sobic005G206800 Sobic002G066700--Sobic002G016000 Sobic002G304500--Sobic004G064800 Sobic002G304500--Sobic005G201200 Sobic002G304500--Sobic008G007800 Sobic002G304500--Sobic010G255400 Sobic002G304500--Sobic002G016000 Sobic006G199500 Sobic006G199500 Sobic002G304500--Sobic006G199500 Sobic002G304500--Sobic004G328100 Sobic008G007700 Sobic008G007700 Sobic002G304500--Sobic008G007700 Sobic004G038400 Sobic004G038400 Sobic002G304500--Sobic004G038400 Sobic002G158300--Sobic002G016000 Sobic002G158300--Sobic010G255400 Sobic002G015700 Sobic002G015700 Sobic002G158300--Sobic002G015700 Sobic002G158300--Sobic002G304500 Sobic002G158300--Sobic008G041300 Sobic002G158300--Sobic005G201200 Sobic003G211800 Sobic003G211800 Sobic002G158300--Sobic003G211800 Sobic002G158300--Sobic004G064800 Sobic006G013600 Sobic006G013600 Sobic002G158300--Sobic006G013600 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic004G328100--Sobic008G007800 Sobic004G328100--Sobic002G361500 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic004G328100--Sobic002G016000 Sobic001G080800 Sobic001G080800 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic006G038700--Sobic009G006700 Sobic006G038700--Sobic001G117701 Sobic006G038700--Sobic005G201200 Sobic006G038700--Sobic002G016000 Sobic008G105600 Sobic008G105600 Sobic006G038700--Sobic008G105600 Sobic010G143633 Sobic010G143633 Sobic006G038700--Sobic010G143633 Sobic006G038700--Sobic002G361500 Sobic005G144500 Sobic005G144500 Sobic006G038700--Sobic005G144500 Sobic006G038700--Sobic010G198400
Octagon: transcription factors


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