Gene annotation
Transcriptome id Sobic.004G328100.2,Sobic.004G328100.1
Synonym Sb04g035730
Functional annotation expressed protein
UniProt A0A1Z5RQZ7 , C5XUE5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g55090.1 : expressed protein
MaizeGDB (Corn) Zm00025a032949
Brachypodium KQK01119 , KQK01121 , KQK01120 , PNT69335
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
2 Sobic.002G382100 LTPL56 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.008G007800 - -
4 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
5 Sobic.005G201200 - -
6 Sobic.002G377900 mitosis protein dim1, putative, expressed -
7 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
8 Sobic.001G080800 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
9 Sobic.010G198400 expressed protein -
10 Sobic.004G064800 haemolysin-III, putative, expressed K07297: adiponectin receptor
11 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
12 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
13 Sobic.006G038700 - -
14 Sobic.008G007700 expressed protein -
15 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
16 Sobic.004G329201 - K02260: cytochrome c oxidase assembly protein subunit 17
17 Sobic.009G006700 vacuolar ATP synthase, putative, expressed K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
18 Sobic.002G424200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
19 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
20 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O


Gene co-expression network
sample Sobic004G328100 Sobic004G328100 Sobic002G304500 Sobic002G304500 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic004G328100--Sobic002G361500 Sobic005G201200 Sobic005G201200 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic002G016000 Sobic002G016000 Sobic004G328100--Sobic002G016000 Sobic001G080800 Sobic001G080800 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic004G064800 Sobic004G064800 Sobic002G304500--Sobic004G064800 Sobic002G304500--Sobic005G201200 Sobic002G304500--Sobic008G007800 Sobic010G255400 Sobic010G255400 Sobic002G304500--Sobic010G255400 Sobic002G304500--Sobic002G016000 Sobic006G199500 Sobic006G199500 Sobic002G304500--Sobic006G199500 Sobic002G304500--Sobic004G328100 Sobic008G007700 Sobic008G007700 Sobic002G304500--Sobic008G007700 Sobic004G038400 Sobic004G038400 Sobic002G304500--Sobic004G038400 Sobic002G382100--Sobic002G361500 Sobic002G382100--Sobic004G328100 Sobic002G382100--Sobic010G198400 Sobic002G424200 Sobic002G424200 Sobic002G382100--Sobic002G424200 Sobic001G093666 Sobic001G093666 Sobic002G382100--Sobic001G093666 Sobic006G038700 Sobic006G038700 Sobic002G382100--Sobic006G038700 Sobic002G382100--Sobic006G199500 Sobic005G144500 Sobic005G144500 Sobic002G382100--Sobic005G144500 Sobic004G020200 Sobic004G020200 Sobic002G382100--Sobic004G020200 Sobic008G007800--Sobic004G064800 Sobic008G007800--Sobic005G201200 Sobic009G048700 Sobic009G048700 Sobic008G007800--Sobic009G048700 Sobic008G007800--Sobic006G199500 Sobic009G006700 Sobic009G006700 Sobic008G007800--Sobic009G006700 Sobic009G145000 Sobic009G145000 Sobic008G007800--Sobic009G145000 Sobic008G007800--Sobic010G255400 Sobic002G243400 Sobic002G243400 Sobic008G007800--Sobic002G243400 Sobic009G008000 Sobic009G008000 Sobic008G007800--Sobic009G008000 Sobic002G361500--Sobic002G424200 Sobic002G361500--Sobic009G006700 Sobic002G361500--Sobic005G144500 Sobic002G361500--Sobic006G038700 Sobic002G361500--Sobic010G198400 Sobic007G219601 Sobic007G219601 Sobic002G361500--Sobic007G219601 Sobic002G361500--Sobic009G008000 Sobic002G361500--Sobic004G020200 Sobic006G254400 Sobic006G254400 Sobic002G361500--Sobic006G254400 Sobic005G201200--Sobic002G016000 Sobic005G201200--Sobic008G007800 Sobic005G201200--Sobic006G038700 Sobic005G201200--Sobic004G064800 Sobic005G201200--Sobic009G006700 Sobic005G201200--Sobic010G255400 Sobic002G066700 Sobic002G066700 Sobic005G201200--Sobic002G066700 Sobic005G201200--Sobic002G304500 Sobic002G147400 Sobic002G147400 Sobic005G201200--Sobic002G147400 Sobic002G377900--Sobic004G328100 Sobic002G377900--Sobic002G304500 Sobic005G063200 Sobic005G063200 Sobic002G377900--Sobic005G063200 Sobic002G377900--Sobic004G064800 Sobic002G377900--Sobic008G007800 Sobic001G280500 Sobic001G280500 Sobic002G377900--Sobic001G280500 Sobic010G160300 Sobic010G160300 Sobic002G377900--Sobic010G160300 Sobic002G348400 Sobic002G348400 Sobic002G377900--Sobic002G348400 Sobic002G377900--Sobic008G007700 Sobic002G016000--Sobic005G201200 Sobic002G016000--Sobic006G038700 Sobic008G041300 Sobic008G041300 Sobic002G016000--Sobic008G041300 Sobic002G016000--Sobic010G255400 Sobic002G016000--Sobic008G007800 Sobic002G016000--Sobic002G361500 Sobic001G117701 Sobic001G117701 Sobic002G016000--Sobic001G117701 Sobic002G016000--Sobic004G064800 Sobic002G016000--Sobic009G006700 Sobic001G485000 Sobic001G485000 Sobic001G080800--Sobic001G485000 Sobic003G217800 Sobic003G217800 Sobic001G080800--Sobic003G217800 Sobic009G017600 Sobic009G017600 Sobic001G080800--Sobic009G017600 Sobic007G144100 Sobic007G144100 Sobic001G080800--Sobic007G144100 Sobic001G080800--Sobic004G328100 Sobic003G352900 Sobic003G352900 Sobic001G080800--Sobic003G352900 Sobic005G045800 Sobic005G045800 Sobic001G080800--Sobic005G045800 Sobic003G349900 Sobic003G349900 Sobic001G080800--Sobic003G349900 Sobic002G414800 Sobic002G414800 Sobic001G080800--Sobic002G414800 Sobic010G198400--Sobic002G424200 Sobic010G038000 Sobic010G038000 Sobic010G198400--Sobic010G038000 Sobic010G198400--Sobic006G254400 Sobic010G198400--Sobic009G006700 Sobic010G198400--Sobic009G048700 Sobic010G198400--Sobic004G020200 Sobic010G198400--Sobic002G243400 Sobic010G198400--Sobic006G199500 Sobic010G198400--Sobic009G008000
Octagon: transcription factors


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