Gene annotation
Transcriptome id Sobic.004G329201.1
Synonym -
Functional annotation -
UniProt A0A1Z5RR07
Pfam PF05051
Panther DB PTHR16719 PTHR16719:SF2
NCBI CDD -
KEGG Orthology K02260; cytochrome c oxidase assembly protein subunit 17
Gene Ontology GO:0016531; copper chaperone activity GO:0006825copper ion transport GO:0005758mitochondrial intermembrane space GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT3G15352 : cytochrome c oxidase 17
RAP-DB (Rice) LOC_Os02g55134.1 : cytochrome c oxidase copper chaperone, putative, expressed
MaizeGDB (Corn) Zm00025a032942
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G144500 glycosyltransferase, putative, expressed -
2 Sobic.006G254400 expressed protein -
3 Sobic.002G424200 SNF1-related protein kinase regulatory subunit beta-1, putative, expressed K07199: 5'-AMP-activated protein kinase, regulatory beta subunit
4 Sobic.004G116050 - -
5 Sobic.002G361500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Indole-acetic acid (IAA)-amido synthetase(PubMedID : 30367619)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
6 Sobic.008G095633 - -
7 Sobic.010G049700 expressed protein -
8 Sobic.010G198400 expressed protein -
9 Sobic.010G038000 ATP-binding region, ATPase-like domain containing protein, expressed -
10 Sobic.009G006700 vacuolar ATP synthase, putative, expressed K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
11 Sobic.003G349900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
12 Sobic.001G117701 - -
13 Sobic.001G093666 - -
14 Sobic.002G123300 expressed protein -
15 Sobic.004G020200 expressed protein -
16 Sobic.004G328100 expressed protein -
17 Sobic.006G038700 - -
18 Sobic.010G143633 - -
19 Sobic.007G219601 - -
20 Sobic.006G064450 - -


Gene co-expression network
sample Sobic004G329201 Sobic004G329201 Sobic005G144500 Sobic005G144500 Sobic004G329201--Sobic005G144500 Sobic006G254400 Sobic006G254400 Sobic004G329201--Sobic006G254400 Sobic002G424200 Sobic002G424200 Sobic004G329201--Sobic002G424200 Sobic004G116050 Sobic004G116050 Sobic004G329201--Sobic004G116050 Sobic002G361500 Sobic002G361500 Sobic004G329201--Sobic002G361500 Sobic008G095633 Sobic008G095633 Sobic004G329201--Sobic008G095633 Sobic010G049700 Sobic010G049700 Sobic004G329201--Sobic010G049700 Sobic010G198400 Sobic010G198400 Sobic004G329201--Sobic010G198400 Sobic010G038000 Sobic010G038000 Sobic004G329201--Sobic010G038000 Sobic006G064450 Sobic006G064450 Sobic005G144500--Sobic006G064450 Sobic007G219601 Sobic007G219601 Sobic005G144500--Sobic007G219601 Sobic007G094700 Sobic007G094700 Sobic005G144500--Sobic007G094700 Sobic008G155700 Sobic008G155700 Sobic005G144500--Sobic008G155700 Sobic009G006700 Sobic009G006700 Sobic005G144500--Sobic009G006700 Sobic003G133600 Sobic003G133600 Sobic005G144500--Sobic003G133600 Sobic004G203150 Sobic004G203150 Sobic005G144500--Sobic004G203150 Sobic005G144500--Sobic010G049700 Sobic005G144500--Sobic010G038000 Sobic004G020200 Sobic004G020200 Sobic006G254400--Sobic004G020200 Sobic006G254400--Sobic010G198400 Sobic006G254400--Sobic002G424200 Sobic001G417700 Sobic001G417700 Sobic006G254400--Sobic001G417700 Sobic006G254400--Sobic010G038000 Sobic002G418300 Sobic002G418300 Sobic006G254400--Sobic002G418300 Sobic009G048700 Sobic009G048700 Sobic006G254400--Sobic009G048700 Sobic006G254400--Sobic005G144500 Sobic003G211800 Sobic003G211800 Sobic006G254400--Sobic003G211800 Sobic002G424200--Sobic010G198400 Sobic009G008000 Sobic009G008000 Sobic002G424200--Sobic009G008000 Sobic002G424200--Sobic007G219601 Sobic002G424200--Sobic008G155700 Sobic002G424200--Sobic009G006700 Sobic002G424200--Sobic004G020200 Sobic002G424200--Sobic007G094700 Sobic002G424200--Sobic004G203150 Sobic002G424200--Sobic006G254400 Sobic004G116050--Sobic010G049700 Sobic010G143633 Sobic010G143633 Sobic004G116050--Sobic010G143633 Sobic004G116050--Sobic005G144500 Sobic001G117701 Sobic001G117701 Sobic004G116050--Sobic001G117701 Sobic006G038700 Sobic006G038700 Sobic004G116050--Sobic006G038700 Sobic001G345500 Sobic001G345500 Sobic004G116050--Sobic001G345500 Sobic004G116050--Sobic006G064450 Sobic004G116050--Sobic009G006700 Sobic008G105600 Sobic008G105600 Sobic004G116050--Sobic008G105600 Sobic002G361500--Sobic002G424200 Sobic002G361500--Sobic009G006700 Sobic002G361500--Sobic005G144500 Sobic002G361500--Sobic006G038700 Sobic002G361500--Sobic010G198400 Sobic002G361500--Sobic007G219601 Sobic002G361500--Sobic009G008000 Sobic002G361500--Sobic004G020200 Sobic002G361500--Sobic006G254400 Sobic008G095633--Sobic009G006700 Sobic008G095633--Sobic010G038000 Sobic008G095633--Sobic006G038700 Sobic008G095633--Sobic001G117701 Sobic008G095633--Sobic005G144500 Sobic008G095633--Sobic002G424200 Sobic002G243400 Sobic002G243400 Sobic008G095633--Sobic002G243400 Sobic008G095633--Sobic010G198400 Sobic008G007800 Sobic008G007800 Sobic008G095633--Sobic008G007800 Sobic010G049700--Sobic004G116050 Sobic010G049700--Sobic005G144500 Sobic010G049700--Sobic010G143633 Sobic010G049700--Sobic006G064450 Sobic010G049700--Sobic001G345500 Sobic010G049700--Sobic009G006700 Sobic010G049700--Sobic007G219601 Sobic010G049700--Sobic006G038700 Sobic010G049700--Sobic007G094700 Sobic010G198400--Sobic002G424200 Sobic010G198400--Sobic010G038000 Sobic010G198400--Sobic006G254400 Sobic010G198400--Sobic009G006700 Sobic010G198400--Sobic009G048700 Sobic010G198400--Sobic004G020200 Sobic010G198400--Sobic002G243400 Sobic006G199500 Sobic006G199500 Sobic010G198400--Sobic006G199500 Sobic010G198400--Sobic009G008000 Sobic010G038000--Sobic009G006700 Sobic010G038000--Sobic009G048700 Sobic010G038000--Sobic007G219601 Sobic010G038000--Sobic010G198400 Sobic010G038000--Sobic001G417700 Sobic010G038000--Sobic004G020200 Sobic010G038000--Sobic007G094700 Sobic010G038000--Sobic002G243400 Sobic010G038000--Sobic008G155700
Octagon: transcription factors


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