Gene annotation
Transcriptome id Sobic.003G308300.1
Synonym Sb03g035680
Functional annotation OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed
UniProt C5XKY2
Pfam PF05577
Panther DB PTHR11010 PTHR11010:SF38
NCBI CDD -
KEGG Orthology K01285; lysosomal Pro-X carboxypeptidase
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G65760 : Serine carboxypeptidase S28 family protein
RAP-DB (Rice) LOC_Os01g56150.1 : OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a039943
Brachypodium PNT72926 , PNT72927 , KQK09930 , KQK09931
Barley HORVU3Hr1G074620.6 , HORVU3Hr1G074620.7 , HORVU3Hr1G074620.4 , HORVU3Hr1G074620.5 , HORVU3Hr1G074620.2 , HORVU3Hr1G074620.3 , HORVU3Hr1G074620.1
Wheat TraesCS3D02G302600 , TraesCS3B02G337400 , TraesCSU02G040600
Populus -


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cDNA sequences
Sobic.003G308300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
2 Sobic.008G013200 expressed protein -
3 Sobic.009G186700 TraB family protein, putative, expressed -
4 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
5 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
6 Sobic.001G305900 GTP binding protein, putative, expressed -
7 Sobic.004G328100 expressed protein -
8 Sobic.006G100266 - -
9 Sobic.003G270100 dehydrin family protein, expressed -
10 Sobic.002G304500 mutS family domain IV containing protein, expressed K08740: DNA mismatch repair protein MSH4
11 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
12 Sobic.010G069500 zinc ion binding protein, putative, expressed -
13 Sobic.002G377900 mitosis protein dim1, putative, expressed -
14 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
15 Sobic.002G016000 OsFBL32 - F-box domain and LRR containing protein, expressed -
16 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
17 Sobic.005G201200 - -
18 Sobic.002G158300 ankyrin, putative, expressed -
19 Sobic.010G255400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
20 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G308300 Sobic003G308300 Sobic003G255700 Sobic003G255700 Sobic003G308300--Sobic003G255700 Sobic008G013200 Sobic008G013200 Sobic003G308300--Sobic008G013200 Sobic009G186700 Sobic009G186700 Sobic003G308300--Sobic009G186700 Sobic007G148400 Sobic007G148400 Sobic003G308300--Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic003G308300--Sobic007G218600 Sobic001G305900 Sobic001G305900 Sobic003G308300--Sobic001G305900 Sobic004G328100 Sobic004G328100 Sobic003G308300--Sobic004G328100 Sobic006G100266 Sobic006G100266 Sobic003G308300--Sobic006G100266 Sobic003G270100 Sobic003G270100 Sobic003G308300--Sobic003G270100 Sobic003G255700--Sobic006G100266 Sobic003G255700--Sobic003G308300 Sobic003G255700--Sobic009G186700 Sobic002G066700 Sobic002G066700 Sobic003G255700--Sobic002G066700 Sobic003G255700--Sobic001G305900 Sobic003G255700--Sobic008G013200 Sobic002G016000 Sobic002G016000 Sobic003G255700--Sobic002G016000 Sobic001G050500 Sobic001G050500 Sobic003G255700--Sobic001G050500 Sobic005G201200 Sobic005G201200 Sobic003G255700--Sobic005G201200 Sobic008G013200--Sobic003G308300 Sobic008G013200--Sobic002G016000 Sobic008G013200--Sobic003G255700 Sobic008G013200--Sobic005G201200 Sobic008G013200--Sobic002G066700 Sobic002G304500 Sobic002G304500 Sobic008G013200--Sobic002G304500 Sobic002G158300 Sobic002G158300 Sobic008G013200--Sobic002G158300 Sobic008G013200--Sobic004G328100 Sobic006G038700 Sobic006G038700 Sobic008G013200--Sobic006G038700 Sobic009G186700--Sobic007G218600 Sobic009G186700--Sobic003G255700 Sobic009G186700--Sobic001G305900 Sobic009G186700--Sobic003G308300 Sobic009G186700--Sobic001G050500 Sobic001G114200 Sobic001G114200 Sobic009G186700--Sobic001G114200 Sobic001G280500 Sobic001G280500 Sobic009G186700--Sobic001G280500 Sobic009G186700--Sobic008G013200 Sobic009G186700--Sobic007G148400 Sobic007G148400--Sobic007G218600 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic007G148400--Sobic009G186700 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic007G148400--Sobic003G255700 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic007G218600--Sobic009G186700 Sobic007G218600--Sobic001G305900 Sobic007G218600--Sobic007G148400 Sobic007G218600--Sobic003G255700 Sobic007G218600--Sobic001G280500 Sobic007G218600--Sobic003G308300 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic001G305900--Sobic007G218600 Sobic001G305900--Sobic001G050500 Sobic005G063200 Sobic005G063200 Sobic001G305900--Sobic005G063200 Sobic001G305900--Sobic009G186700 Sobic001G305900--Sobic003G255700 Sobic002G348400 Sobic002G348400 Sobic001G305900--Sobic002G348400 Sobic001G305900--Sobic001G280500 Sobic001G305900--Sobic002G158300 Sobic001G305900--Sobic003G308300 Sobic004G328100--Sobic002G304500 Sobic002G382100 Sobic002G382100 Sobic004G328100--Sobic002G382100 Sobic008G007800 Sobic008G007800 Sobic004G328100--Sobic008G007800 Sobic002G361500 Sobic002G361500 Sobic004G328100--Sobic002G361500 Sobic004G328100--Sobic005G201200 Sobic002G377900 Sobic002G377900 Sobic004G328100--Sobic002G377900 Sobic004G328100--Sobic002G016000 Sobic001G080800 Sobic001G080800 Sobic004G328100--Sobic001G080800 Sobic010G198400 Sobic010G198400 Sobic004G328100--Sobic010G198400 Sobic006G100266--Sobic003G255700 Sobic006G100266--Sobic003G308300 Sobic006G100266--Sobic001G305900 Sobic002G274700 Sobic002G274700 Sobic006G100266--Sobic002G274700 Sobic006G100266--Sobic003G270100 Sobic008G087200 Sobic008G087200 Sobic006G100266--Sobic008G087200 Sobic002G322400 Sobic002G322400 Sobic006G100266--Sobic002G322400 Sobic006G100266--Sobic009G186700 Sobic010G009600 Sobic010G009600 Sobic006G100266--Sobic010G009600 Sobic001G203800 Sobic001G203800 Sobic003G270100--Sobic001G203800 Sobic003G270100--Sobic003G308300 Sobic003G270100--Sobic003G255700 Sobic003G270100--Sobic001G050500 Sobic004G186300 Sobic004G186300 Sobic003G270100--Sobic004G186300 Sobic003G270100--Sobic006G100266 Sobic003G270100--Sobic004G328100 Sobic003G270100--Sobic001G305900 Sobic006G208200 Sobic006G208200 Sobic003G270100--Sobic006G208200
Octagon: transcription factors


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