Gene annotation
Transcriptome id Sobic.007G148400.2,Sobic.007G148400.1
Synonym 1, CDKC, Sb07g022260
Functional annotation cyclin-dependent kinase C-3, putative, expressed
UniProt C5YLT5 , C5YLT2
Pfam PF07714
Panther DB PTHR24056 PTHR24056:SF211
NCBI CDD KOG0663; Protein kinase PITSLRE and related kinases KOG0594Protein kinase PCTAIRE and related kinases KOG0659Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7
KEGG Orthology K08819; cyclin-dependent kinase 12/13
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10270 : cyclin-dependent kinase C;1
RAP-DB (Rice) LOC_Os08g35220.1 : cyclin-dependent kinase C-3, putative, expressed
MaizeGDB (Corn) Zm00025a005760
Brachypodium KQJ98543
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G148400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G218600 phosphoribosyl transferase, putative, expressed K00761: upp, uracil phosphoribosyltransferase
2 Sobic.003G308300 OsProCP1 - Putative Lysosomal Pro-x Carboxypeptidase homologue, expressed K01285: lysosomal Pro-X carboxypeptidase
3 Sobic.006G222500 expressed protein -
4 Sobic.009G186700 TraB family protein, putative, expressed -
5 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
6 Sobic.007G146600 conserved oligomeric Golgi complex component 3, putative, expressed -
7 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.001G305900 GTP binding protein, putative, expressed -
9 Sobic.002G276800 ER lumen protein retaining receptor, putative, expressed -
10 Sobic.003G270100 dehydrin family protein, expressed -
11 Sobic.006G210700 potassium transporter, putative, expressed -
12 Sobic.009G059400 expressed protein -
13 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
14 Sobic.006G100266 - -
15 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
16 Sobic.001G025700 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
17 Sobic.010G160300 RNA recognition motif containing protein, putative, expressed -
18 Sobic.010G250000 60S ribosomal protein L8, putative, expressed -
19 Sobic.004G186300 protein phosphotase protein, putative, expressed -
20 Sobic.001G114200 transmembrane anterior posterior transformation 1, putative, expressed -


Gene co-expression network
sample Sobic007G148400 Sobic007G148400 Sobic007G218600 Sobic007G218600 Sobic007G148400--Sobic007G218600 Sobic003G308300 Sobic003G308300 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic009G186700 Sobic009G186700 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic003G255700 Sobic003G255700 Sobic007G148400--Sobic003G255700 Sobic001G305900 Sobic001G305900 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic007G218600--Sobic009G186700 Sobic007G218600--Sobic001G305900 Sobic007G218600--Sobic007G148400 Sobic007G218600--Sobic003G255700 Sobic001G280500 Sobic001G280500 Sobic007G218600--Sobic001G280500 Sobic007G218600--Sobic003G308300 Sobic001G114200 Sobic001G114200 Sobic007G218600--Sobic001G114200 Sobic010G181600 Sobic010G181600 Sobic007G218600--Sobic010G181600 Sobic010G160300 Sobic010G160300 Sobic007G218600--Sobic010G160300 Sobic003G308300--Sobic003G255700 Sobic008G013200 Sobic008G013200 Sobic003G308300--Sobic008G013200 Sobic003G308300--Sobic009G186700 Sobic003G308300--Sobic007G148400 Sobic003G308300--Sobic007G218600 Sobic003G308300--Sobic001G305900 Sobic004G328100 Sobic004G328100 Sobic003G308300--Sobic004G328100 Sobic006G100266 Sobic006G100266 Sobic003G308300--Sobic006G100266 Sobic003G270100 Sobic003G270100 Sobic003G308300--Sobic003G270100 Sobic006G222500--Sobic007G148400 Sobic004G186300 Sobic004G186300 Sobic006G222500--Sobic004G186300 Sobic006G222500--Sobic007G146600 Sobic003G404100 Sobic003G404100 Sobic006G222500--Sobic003G404100 Sobic006G222500--Sobic003G270100 Sobic006G222500--Sobic007G218600 Sobic001G193100 Sobic001G193100 Sobic006G222500--Sobic001G193100 Sobic002G419000 Sobic002G419000 Sobic006G222500--Sobic002G419000 Sobic006G222500--Sobic003G308300 Sobic009G186700--Sobic007G218600 Sobic009G186700--Sobic003G255700 Sobic009G186700--Sobic001G305900 Sobic009G186700--Sobic003G308300 Sobic009G186700--Sobic001G050500 Sobic009G186700--Sobic001G114200 Sobic009G186700--Sobic001G280500 Sobic009G186700--Sobic008G013200 Sobic009G186700--Sobic007G148400 Sobic001G050500--Sobic001G305900 Sobic001G050500--Sobic003G255700 Sobic001G050500--Sobic009G186700 Sobic001G050500--Sobic007G218600 Sobic001G050500--Sobic003G270100 Sobic001G050500--Sobic007G148400 Sobic001G050500--Sobic003G308300 Sobic001G050500--Sobic010G160300 Sobic001G050500--Sobic006G100266 Sobic007G146600--Sobic007G148400 Sobic001G343000 Sobic001G343000 Sobic007G146600--Sobic001G343000 Sobic007G146600--Sobic006G222500 Sobic009G063800 Sobic009G063800 Sobic007G146600--Sobic009G063800 Sobic002G182000 Sobic002G182000 Sobic007G146600--Sobic002G182000 Sobic003G150900 Sobic003G150900 Sobic007G146600--Sobic003G150900 Sobic003G393200 Sobic003G393200 Sobic007G146600--Sobic003G393200 Sobic005G114800 Sobic005G114800 Sobic007G146600--Sobic005G114800 Sobic010G250000 Sobic010G250000 Sobic007G146600--Sobic010G250000 Sobic003G255700--Sobic006G100266 Sobic003G255700--Sobic003G308300 Sobic003G255700--Sobic009G186700 Sobic002G066700 Sobic002G066700 Sobic003G255700--Sobic002G066700 Sobic003G255700--Sobic001G305900 Sobic003G255700--Sobic008G013200 Sobic002G016000 Sobic002G016000 Sobic003G255700--Sobic002G016000 Sobic003G255700--Sobic001G050500 Sobic005G201200 Sobic005G201200 Sobic003G255700--Sobic005G201200 Sobic001G305900--Sobic007G218600 Sobic001G305900--Sobic001G050500 Sobic005G063200 Sobic005G063200 Sobic001G305900--Sobic005G063200 Sobic001G305900--Sobic009G186700 Sobic001G305900--Sobic003G255700 Sobic002G348400 Sobic002G348400 Sobic001G305900--Sobic002G348400 Sobic001G305900--Sobic001G280500 Sobic002G158300 Sobic002G158300 Sobic001G305900--Sobic002G158300 Sobic001G305900--Sobic003G308300 Sobic001G485300 Sobic001G485300 Sobic002G276800--Sobic001G485300 Sobic001G008100 Sobic001G008100 Sobic002G276800--Sobic001G008100 Sobic002G276800--Sobic007G148400 Sobic006G041800 Sobic006G041800 Sobic002G276800--Sobic006G041800 Sobic003G190600 Sobic003G190600 Sobic002G276800--Sobic003G190600 Sobic003G058500 Sobic003G058500 Sobic002G276800--Sobic003G058500 Sobic001G061200 Sobic001G061200 Sobic002G276800--Sobic001G061200 Sobic002G276800--Sobic001G193100 Sobic002G401700 Sobic002G401700 Sobic002G276800--Sobic002G401700
Octagon: transcription factors


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