Gene annotation
Transcriptome id Sobic.008G011400.1
Synonym TRO, Sb08g001070
Functional annotation ASH-like SPRY domain containing protein, putative, expressed
UniProt A0A1B6PBI9
Pfam PF00622
Panther DB PTHR10598
NCBI CDD -
KEGG Orthology K14964; Set1/Ash2 histone methyltransferase complex subunit ASH2
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G51450 : TRAUCO
RAP-DB (Rice) LOC_Os12g04930.1 : ASH-like SPRY domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a013045
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G011400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G381750 - K03094: SKP1, S-phase kinase-associated protein 1
2 Sobic.010G022600 encodes granule-bound ADP-glucose-gluosyl transferase(PubMedID : 20585750)@-(PubMedID : 9866201)@starch synthase, putative, expressed K13679: granule-bound starch synthase
3 Sobic.006G036201 - -
4 Sobic.001G259300 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
5 Sobic.005G074900 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.009G086800 no apical meristem protein, putative, expressed -
7 Sobic.002G291132 - -
8 Sobic.009G051301 - -
9 Sobic.003G323000 - -
10 Sobic.009G061800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
11 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
12 Sobic.004G116200 expressed protein -
13 Sobic.006G279000 expressed protein -
14 Sobic.001G530400 expressed protein -
15 Sobic.009G207500 OsFBX238 - F-box domain containing protein, expressed -
16 Sobic.002G147500 early fruit mRNA, putative, expressed -
17 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
18 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
19 Sobic.002G211501 - -
20 Sobic.004G196200 cytochrome P450, putative, expressed K12639: CYP724B1, cytochrome P450 family 724 subfamily B polypeptide 1


Gene co-expression network
sample Sobic008G011400 Sobic008G011400 Sobic002G381750 Sobic002G381750 Sobic008G011400--Sobic002G381750 Sobic010G022600 Sobic010G022600 Sobic008G011400--Sobic010G022600 Sobic006G036201 Sobic006G036201 Sobic008G011400--Sobic006G036201 Sobic001G259300 Sobic001G259300 Sobic008G011400--Sobic001G259300 Sobic005G074900 Sobic005G074900 Sobic008G011400--Sobic005G074900 Sobic009G086800 Sobic009G086800 Sobic008G011400--Sobic009G086800 Sobic002G291132 Sobic002G291132 Sobic008G011400--Sobic002G291132 Sobic009G051301 Sobic009G051301 Sobic008G011400--Sobic009G051301 Sobic003G323000 Sobic003G323000 Sobic008G011400--Sobic003G323000 Sobic002G381750--Sobic008G011400 Sobic003G027700 Sobic003G027700 Sobic002G381750--Sobic003G027700 Sobic002G381750--Sobic001G259300 Sobic002G381750--Sobic003G323000 Sobic001G530400 Sobic001G530400 Sobic002G381750--Sobic001G530400 Sobic003G342000 Sobic003G342000 Sobic002G381750--Sobic003G342000 Sobic009G061800 Sobic009G061800 Sobic002G381750--Sobic009G061800 Sobic002G381750--Sobic002G291132 Sobic008G013100 Sobic008G013100 Sobic002G381750--Sobic008G013100 Sobic005G226150 Sobic005G226150 Sobic010G022600--Sobic005G226150 Sobic010G107300 Sobic010G107300 Sobic010G022600--Sobic010G107300 Sobic002G417900 Sobic002G417900 Sobic010G022600--Sobic002G417900 Sobic004G085100 Sobic004G085100 Sobic010G022600--Sobic004G085100 Sobic001G362900 Sobic001G362900 Sobic010G022600--Sobic001G362900 Sobic002G088000 Sobic002G088000 Sobic010G022600--Sobic002G088000 Sobic005G083160 Sobic005G083160 Sobic010G022600--Sobic005G083160 Sobic004G171500 Sobic004G171500 Sobic010G022600--Sobic004G171500 Sobic001G297800 Sobic001G297800 Sobic010G022600--Sobic001G297800 Sobic006G036201--Sobic005G074900 Sobic006G036201--Sobic009G051301 Sobic006G036201--Sobic002G291132 Sobic006G036201--Sobic009G086800 Sobic006G036201--Sobic001G530400 Sobic004G196200 Sobic004G196200 Sobic006G036201--Sobic004G196200 Sobic006G036201--Sobic009G061800 Sobic005G148600 Sobic005G148600 Sobic006G036201--Sobic005G148600 Sobic006G279000 Sobic006G279000 Sobic006G036201--Sobic006G279000 Sobic001G259300--Sobic003G323000 Sobic003G350900 Sobic003G350900 Sobic001G259300--Sobic003G350900 Sobic005G188000 Sobic005G188000 Sobic001G259300--Sobic005G188000 Sobic001G259300--Sobic009G061800 Sobic001G259300--Sobic008G013100 Sobic003G105600 Sobic003G105600 Sobic001G259300--Sobic003G105600 Sobic009G022700 Sobic009G022700 Sobic001G259300--Sobic009G022700 Sobic009G186400 Sobic009G186400 Sobic001G259300--Sobic009G186400 Sobic008G064000 Sobic008G064000 Sobic001G259300--Sobic008G064000 Sobic005G074900--Sobic006G036201 Sobic005G074900--Sobic009G051301 Sobic005G074900--Sobic005G148600 Sobic005G074900--Sobic004G196200 Sobic005G090500 Sobic005G090500 Sobic005G074900--Sobic005G090500 Sobic006G271400 Sobic006G271400 Sobic005G074900--Sobic006G271400 Sobic005G074800 Sobic005G074800 Sobic005G074900--Sobic005G074800 Sobic005G074900--Sobic009G086800 Sobic005G074900--Sobic006G279000 Sobic007G147300 Sobic007G147300 Sobic009G086800--Sobic007G147300 Sobic004G116200 Sobic004G116200 Sobic009G086800--Sobic004G116200 Sobic008G001700 Sobic008G001700 Sobic009G086800--Sobic008G001700 Sobic009G086800--Sobic009G061800 Sobic009G086800--Sobic002G291132 Sobic009G086800--Sobic002G088000 Sobic009G086800--Sobic005G188000 Sobic009G086800--Sobic003G350900 Sobic009G086800--Sobic004G171500 Sobic002G211501 Sobic002G211501 Sobic002G291132--Sobic002G211501 Sobic002G291132--Sobic009G061800 Sobic002G291132--Sobic009G086800 Sobic002G291132--Sobic001G530400 Sobic002G291132--Sobic001G259300 Sobic002G291132--Sobic006G036201 Sobic010G216800 Sobic010G216800 Sobic002G291132--Sobic010G216800 Sobic002G291132--Sobic003G350900 Sobic002G291132--Sobic005G188000 Sobic009G051301--Sobic005G074900 Sobic009G051301--Sobic006G036201 Sobic009G051301--Sobic004G196200 Sobic009G051301--Sobic005G148600 Sobic009G051301--Sobic005G090500 Sobic009G051301--Sobic005G074800 Sobic009G051301--Sobic006G271400 Sobic007G082900 Sobic007G082900 Sobic009G051301--Sobic007G082900 Sobic009G051301--Sobic009G086800 Sobic003G323000--Sobic001G259300 Sobic003G323000--Sobic008G013100 Sobic003G323000--Sobic003G105600 Sobic003G323000--Sobic003G350900 Sobic003G323000--Sobic005G188000 Sobic003G323000--Sobic009G022700 Sobic003G323000--Sobic009G186400 Sobic003G323000--Sobic008G064000 Sobic006G059900 Sobic006G059900 Sobic003G323000--Sobic006G059900
Octagon: transcription factors


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