Gene annotation
Transcriptome id Sobic.002G291132.2,Sobic.002G291132.1
Synonym -
Functional annotation -
UniProt A0A1W0W692
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G211501 - -
2 Sobic.009G061800 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
3 Sobic.009G086800 no apical meristem protein, putative, expressed -
4 Sobic.001G530400 expressed protein -
5 Sobic.001G259300 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
6 Sobic.006G036201 - -
7 Sobic.010G216800 expressed protein -
8 Sobic.003G350900 homeobox domain containing protein, expressed -
9 Sobic.005G188000 no apical meristem protein, putative, expressed -
10 Sobic.004G116200 expressed protein -
11 Sobic.002G088000 cytokinin-N-glucosyltransferase 1, putative, expressed -
12 Sobic.007G147300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.003G323000 - -
14 Sobic.005G074900 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.010G274300 ZOS6-11 - C2H2 zinc finger protein, expressed -
16 Sobic.008G001700 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@Phylogenetic analysis of cloned SbDof genes along with other reported Dof proteins. The 3D structural prediction of SbDof proteins based on multiple threading method.(PubMedID : 22476870)@"PBF1(Ortholog in maize:Lang et al., 2014)"(PubMedID : 31659911)@Upregulated in response to drought and salt stress(PubMedID : 27230576)@dof zinc finger domain containing protein, putative, expressed -
17 Sobic.004G090300 OsFBX46 - F-box domain containing protein, expressed -
18 Sobic.009G022700 - -
19 Sobic.008G013100 expressed protein -
20 Sobic.004G085100 mitochondrial carrier protein, putative, expressed -


Gene co-expression network
sample Sobic002G291132 Sobic002G291132 Sobic002G211501 Sobic002G211501 Sobic002G291132--Sobic002G211501 Sobic009G061800 Sobic009G061800 Sobic002G291132--Sobic009G061800 Sobic009G086800 Sobic009G086800 Sobic002G291132--Sobic009G086800 Sobic001G530400 Sobic001G530400 Sobic002G291132--Sobic001G530400 Sobic001G259300 Sobic001G259300 Sobic002G291132--Sobic001G259300 Sobic006G036201 Sobic006G036201 Sobic002G291132--Sobic006G036201 Sobic010G216800 Sobic010G216800 Sobic002G291132--Sobic010G216800 Sobic003G350900 Sobic003G350900 Sobic002G291132--Sobic003G350900 Sobic005G188000 Sobic005G188000 Sobic002G291132--Sobic005G188000 Sobic002G211501--Sobic002G291132 Sobic002G211501--Sobic010G216800 Sobic010G274300 Sobic010G274300 Sobic002G211501--Sobic010G274300 Sobic002G211501--Sobic009G086800 Sobic001G234000 Sobic001G234000 Sobic002G211501--Sobic001G234000 Sobic002G211501--Sobic009G061800 Sobic002G211501--Sobic001G259300 Sobic002G211501--Sobic001G530400 Sobic002G211501--Sobic006G036201 Sobic009G061800--Sobic003G350900 Sobic009G061800--Sobic005G188000 Sobic009G061800--Sobic001G259300 Sobic009G061800--Sobic009G086800 Sobic009G061800--Sobic002G291132 Sobic003G323000 Sobic003G323000 Sobic009G061800--Sobic003G323000 Sobic002G088000 Sobic002G088000 Sobic009G061800--Sobic002G088000 Sobic004G116200 Sobic004G116200 Sobic009G061800--Sobic004G116200 Sobic009G022700 Sobic009G022700 Sobic009G061800--Sobic009G022700 Sobic007G147300 Sobic007G147300 Sobic009G086800--Sobic007G147300 Sobic009G086800--Sobic004G116200 Sobic008G001700 Sobic008G001700 Sobic009G086800--Sobic008G001700 Sobic009G086800--Sobic009G061800 Sobic009G086800--Sobic002G291132 Sobic009G086800--Sobic002G088000 Sobic009G086800--Sobic005G188000 Sobic009G086800--Sobic003G350900 Sobic004G171500 Sobic004G171500 Sobic009G086800--Sobic004G171500 Sobic001G530400--Sobic002G291132 Sobic001G530400--Sobic006G036201 Sobic001G530400--Sobic009G061800 Sobic001G530400--Sobic002G211501 Sobic004G090300 Sobic004G090300 Sobic001G530400--Sobic004G090300 Sobic005G074900 Sobic005G074900 Sobic001G530400--Sobic005G074900 Sobic001G530400--Sobic009G086800 Sobic001G530400--Sobic001G234000 Sobic009G051301 Sobic009G051301 Sobic001G530400--Sobic009G051301 Sobic001G259300--Sobic003G323000 Sobic001G259300--Sobic003G350900 Sobic001G259300--Sobic005G188000 Sobic001G259300--Sobic009G061800 Sobic008G013100 Sobic008G013100 Sobic001G259300--Sobic008G013100 Sobic003G105600 Sobic003G105600 Sobic001G259300--Sobic003G105600 Sobic001G259300--Sobic009G022700 Sobic009G186400 Sobic009G186400 Sobic001G259300--Sobic009G186400 Sobic008G064000 Sobic008G064000 Sobic001G259300--Sobic008G064000 Sobic006G036201--Sobic005G074900 Sobic006G036201--Sobic009G051301 Sobic006G036201--Sobic002G291132 Sobic006G036201--Sobic009G086800 Sobic006G036201--Sobic001G530400 Sobic004G196200 Sobic004G196200 Sobic006G036201--Sobic004G196200 Sobic006G036201--Sobic009G061800 Sobic005G148600 Sobic005G148600 Sobic006G036201--Sobic005G148600 Sobic006G279000 Sobic006G279000 Sobic006G036201--Sobic006G279000 Sobic010G216800--Sobic002G211501 Sobic010G216800--Sobic010G274300 Sobic010G216800--Sobic002G291132 Sobic010G010600 Sobic010G010600 Sobic010G216800--Sobic010G010600 Sobic010G216800--Sobic009G061800 Sobic010G216800--Sobic009G086800 Sobic010G216800--Sobic002G088000 Sobic010G216800--Sobic003G350900 Sobic010G216800--Sobic001G259300 Sobic003G350900--Sobic005G188000 Sobic003G350900--Sobic008G064000 Sobic003G350900--Sobic009G061800 Sobic003G350900--Sobic001G259300 Sobic003G350900--Sobic002G088000 Sobic003G156100 Sobic003G156100 Sobic003G350900--Sobic003G156100 Sobic003G350900--Sobic003G323000 Sobic003G350900--Sobic003G105600 Sobic010G034900 Sobic010G034900 Sobic003G350900--Sobic010G034900 Sobic005G188000--Sobic003G350900 Sobic005G188000--Sobic002G088000 Sobic005G188000--Sobic008G064000 Sobic005G188000--Sobic003G156100 Sobic004G085100 Sobic004G085100 Sobic005G188000--Sobic004G085100 Sobic005G188000--Sobic004G116200 Sobic005G188000--Sobic001G259300 Sobic007G083300 Sobic007G083300 Sobic005G188000--Sobic007G083300 Sobic001G362900 Sobic001G362900 Sobic005G188000--Sobic001G362900
Octagon: transcription factors


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