Gene annotation
Transcriptome id Sobic.007G203300.1
Synonym Sb07g027060
Functional annotation CDK-activating kinase assembly factor MAT1 family protein, expressed
UniProt C5YIB4
Pfam PF06391
Panther DB PTHR12683
NCBI CDD -
KEGG Orthology K10842; CDK-activating kinase assembly factor MAT1
Gene Ontology GO:0007049; cell cycle GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT4G30820 : cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related
RAP-DB (Rice) LOC_Os06g07480.1 : CDK-activating kinase assembly factor MAT1 family protein, expressed
MaizeGDB (Corn) Zm00025a016840 , Zm00025a049873
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G056600 expressed protein -
2 Sobic.006G033200 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
3 Sobic.006G180000 syntaxin-18, putative, expressed K08492: syntaxin 18
4 Sobic.003G302900 transcriptional regulator family protein, putative, expressed -
5 Sobic.004G261600 expressed protein -
6 Sobic.003G110000 TBC domain containing protein, expressed -
7 Sobic.009G109925 - -
8 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
9 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
10 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
11 Sobic.010G130000 expressed protein K12199: VTA1, vacuolar protein sorting-associated protein VTA1
12 Sobic.003G264100 - K10843: ERCC3, DNA excision repair protein ERCC-3
13 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
14 Sobic.006G034000 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
15 Sobic.009G143700 no apical meristem protein, putative, expressed -
16 Sobic.001G431000 Sel1 repeat domain containing protein, putative, expressed K14026: SEL1, SEL1 protein
17 Sobic.010G278200 expressed protein -
18 Sobic.010G232600 solute carrier family 35 member F5, putative, expressed K15289: solute carrier family 35, member F5
19 Sobic.005G059600 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.001G413200 expressed protein -


Gene co-expression network
sample Sobic007G203300 Sobic007G203300 Sobic007G056600 Sobic007G056600 Sobic007G203300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic007G203300--Sobic006G033200 Sobic006G180000 Sobic006G180000 Sobic007G203300--Sobic006G180000 Sobic003G302900 Sobic003G302900 Sobic007G203300--Sobic003G302900 Sobic004G261600 Sobic004G261600 Sobic007G203300--Sobic004G261600 Sobic003G110000 Sobic003G110000 Sobic007G203300--Sobic003G110000 Sobic009G109925 Sobic009G109925 Sobic007G203300--Sobic009G109925 Sobic006G126100 Sobic006G126100 Sobic007G203300--Sobic006G126100 Sobic001G079200 Sobic001G079200 Sobic007G203300--Sobic001G079200 Sobic007G056600--Sobic004G261600 Sobic004G228800 Sobic004G228800 Sobic007G056600--Sobic004G228800 Sobic007G056600--Sobic007G203300 Sobic010G232600 Sobic010G232600 Sobic007G056600--Sobic010G232600 Sobic006G077300 Sobic006G077300 Sobic007G056600--Sobic006G077300 Sobic004G124500 Sobic004G124500 Sobic007G056600--Sobic004G124500 Sobic003G126300 Sobic003G126300 Sobic007G056600--Sobic003G126300 Sobic003G119700 Sobic003G119700 Sobic007G056600--Sobic003G119700 Sobic001G251200 Sobic001G251200 Sobic007G056600--Sobic001G251200 Sobic010G130000 Sobic010G130000 Sobic006G033200--Sobic010G130000 Sobic008G124900 Sobic008G124900 Sobic006G033200--Sobic008G124900 Sobic010G278200 Sobic010G278200 Sobic006G033200--Sobic010G278200 Sobic009G138100 Sobic009G138100 Sobic006G033200--Sobic009G138100 Sobic007G093800 Sobic007G093800 Sobic006G033200--Sobic007G093800 Sobic004G202500 Sobic004G202500 Sobic006G033200--Sobic004G202500 Sobic007G179800 Sobic007G179800 Sobic006G033200--Sobic007G179800 Sobic006G033200--Sobic003G302900 Sobic003G312200 Sobic003G312200 Sobic006G033200--Sobic003G312200 Sobic002G303600 Sobic002G303600 Sobic006G180000--Sobic002G303600 Sobic002G047700 Sobic002G047700 Sobic006G180000--Sobic002G047700 Sobic003G264100 Sobic003G264100 Sobic006G180000--Sobic003G264100 Sobic010G223300 Sobic010G223300 Sobic006G180000--Sobic010G223300 Sobic009G092400 Sobic009G092400 Sobic006G180000--Sobic009G092400 Sobic001G007000 Sobic001G007000 Sobic006G180000--Sobic001G007000 Sobic010G020400 Sobic010G020400 Sobic006G180000--Sobic010G020400 Sobic004G092500 Sobic004G092500 Sobic006G180000--Sobic004G092500 Sobic004G028100 Sobic004G028100 Sobic006G180000--Sobic004G028100 Sobic003G302900--Sobic006G033200 Sobic002G311100 Sobic002G311100 Sobic003G302900--Sobic002G311100 Sobic010G147100 Sobic010G147100 Sobic003G302900--Sobic010G147100 Sobic001G107600 Sobic001G107600 Sobic003G302900--Sobic001G107600 Sobic003G302900--Sobic010G278200 Sobic003G302900--Sobic007G203300 Sobic003G302900--Sobic003G264100 Sobic008G047400 Sobic008G047400 Sobic003G302900--Sobic008G047400 Sobic008G093000 Sobic008G093000 Sobic003G302900--Sobic008G093000 Sobic004G261600--Sobic004G228800 Sobic004G261600--Sobic006G126100 Sobic003G209200 Sobic003G209200 Sobic004G261600--Sobic003G209200 Sobic003G104000 Sobic003G104000 Sobic004G261600--Sobic003G104000 Sobic007G005500 Sobic007G005500 Sobic004G261600--Sobic007G005500 Sobic004G261600--Sobic001G251200 Sobic001G415300 Sobic001G415300 Sobic004G261600--Sobic001G415300 Sobic004G004300 Sobic004G004300 Sobic004G261600--Sobic004G004300 Sobic008G099800 Sobic008G099800 Sobic004G261600--Sobic008G099800 Sobic008G098900 Sobic008G098900 Sobic003G110000--Sobic008G098900 Sobic001G085300 Sobic001G085300 Sobic003G110000--Sobic001G085300 Sobic003G166750 Sobic003G166750 Sobic003G110000--Sobic003G166750 Sobic002G275700 Sobic002G275700 Sobic003G110000--Sobic002G275700 Sobic002G430000 Sobic002G430000 Sobic003G110000--Sobic002G430000 Sobic001G194200 Sobic001G194200 Sobic003G110000--Sobic001G194200 Sobic001G370900 Sobic001G370900 Sobic003G110000--Sobic001G370900 Sobic009G131300 Sobic009G131300 Sobic003G110000--Sobic009G131300 Sobic001G117200 Sobic001G117200 Sobic003G110000--Sobic001G117200 Sobic009G110000 Sobic009G110000 Sobic009G109925--Sobic009G110000 Sobic009G109925--Sobic003G264100 Sobic001G128300 Sobic001G128300 Sobic009G109925--Sobic001G128300 Sobic001G441400 Sobic001G441400 Sobic009G109925--Sobic001G441400 Sobic009G109925--Sobic009G131300 Sobic009G109925--Sobic008G098900 Sobic009G109925--Sobic001G370900 Sobic009G143700 Sobic009G143700 Sobic009G109925--Sobic009G143700 Sobic009G109925--Sobic001G251200 Sobic006G126100--Sobic004G004300 Sobic008G004600 Sobic008G004600 Sobic006G126100--Sobic008G004600 Sobic004G039600 Sobic004G039600 Sobic006G126100--Sobic004G039600 Sobic001G534800 Sobic001G534800 Sobic006G126100--Sobic001G534800 Sobic006G126100--Sobic003G104000 Sobic006G012500 Sobic006G012500 Sobic006G126100--Sobic006G012500 Sobic004G135400 Sobic004G135400 Sobic006G126100--Sobic004G135400 Sobic007G132100 Sobic007G132100 Sobic006G126100--Sobic007G132100 Sobic006G208500 Sobic006G208500 Sobic006G126100--Sobic006G208500 Sobic001G390800 Sobic001G390800 Sobic001G079200--Sobic001G390800 Sobic010G205800 Sobic010G205800 Sobic001G079200--Sobic010G205800 Sobic003G233600 Sobic003G233600 Sobic001G079200--Sobic003G233600 Sobic001G241100 Sobic001G241100 Sobic001G079200--Sobic001G241100 Sobic001G079200--Sobic006G126100 Sobic001G079200--Sobic001G007000 Sobic003G273600 Sobic003G273600 Sobic001G079200--Sobic003G273600 Sobic003G169600 Sobic003G169600 Sobic001G079200--Sobic003G169600 Sobic001G000200 Sobic001G000200 Sobic001G079200--Sobic001G000200
Octagon: transcription factors


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