Gene annotation
Transcriptome id Sobic.006G257600.1
Synonym UCH3, Sb06g032100
Functional annotation ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
UniProt A0A1Z5RFH8
Pfam PF01088
Panther DB PTHR10589 PTHR10589:SF31
NCBI CDD KOG1415; Ubiquitin C-terminal hydrolase UCHL1
KEGG Orthology K05609; UCHL3, ubiquitin carboxyl-terminal hydrolase L3
Gene Ontology GO:0006511; ubiquitin-dependent protein catabolic process GO:0005622intracellular GO:0004843thiol-dependent ubiquitin-specific protease activity


Orthologs (automatic annotation)
TAIR AT4G17510 : ubiquitin C-terminal hydrolase 3
RAP-DB (Rice) LOC_Os04g57190.1 : ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
MaizeGDB (Corn) Zm00025a057320
Brachypodium PNT62094
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G257600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
2 Sobic.003G055200 expressed protein -
3 Sobic.002G315100 expressed protein K15083: DNA repair protein RAD16
4 Sobic.002G354800 zinc finger family protein, putative, expressed -
5 Sobic.010G223500 dnaJ domain containing protein, expressed -
6 Sobic.009G069200 glycine-rich protein, putative, expressed -
7 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
8 Sobic.006G015500 ZOS9-03 - C2H2 zinc finger protein, expressed -
9 Sobic.003G284700 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.004G160700 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
11 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
12 Sobic.006G100266 - -
13 Sobic.005G198200 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
14 Sobic.003G010900 expressed protein -
15 Sobic.009G059400 expressed protein -
16 Sobic.003G129300 uridine kinase, putative, expressed -
17 Sobic.002G322400 OsPDIL5-4 protein disulfide isomerase PDIL5-4, expressed -
18 Sobic.006G141600 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
19 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
20 Sobic.003G004600 expressed protein -


Gene co-expression network
sample Sobic006G257600 Sobic006G257600 Sobic009G113100 Sobic009G113100 Sobic006G257600--Sobic009G113100 Sobic003G055200 Sobic003G055200 Sobic006G257600--Sobic003G055200 Sobic002G315100 Sobic002G315100 Sobic006G257600--Sobic002G315100 Sobic002G354800 Sobic002G354800 Sobic006G257600--Sobic002G354800 Sobic010G223500 Sobic010G223500 Sobic006G257600--Sobic010G223500 Sobic009G069200 Sobic009G069200 Sobic006G257600--Sobic009G069200 Sobic002G306600 Sobic002G306600 Sobic006G257600--Sobic002G306600 Sobic006G015500 Sobic006G015500 Sobic006G257600--Sobic006G015500 Sobic003G284700 Sobic003G284700 Sobic006G257600--Sobic003G284700 Sobic009G113100--Sobic009G069200 Sobic001G090300 Sobic001G090300 Sobic009G113100--Sobic001G090300 Sobic005G198200 Sobic005G198200 Sobic009G113100--Sobic005G198200 Sobic001G004100 Sobic001G004100 Sobic009G113100--Sobic001G004100 Sobic002G208400 Sobic002G208400 Sobic009G113100--Sobic002G208400 Sobic007G187600 Sobic007G187600 Sobic009G113100--Sobic007G187600 Sobic003G214700 Sobic003G214700 Sobic009G113100--Sobic003G214700 Sobic001G013300 Sobic001G013300 Sobic009G113100--Sobic001G013300 Sobic006G061100 Sobic006G061100 Sobic009G113100--Sobic006G061100 Sobic003G055200--Sobic002G354800 Sobic010G207900 Sobic010G207900 Sobic003G055200--Sobic010G207900 Sobic003G055200--Sobic002G315100 Sobic001G278700 Sobic001G278700 Sobic003G055200--Sobic001G278700 Sobic002G230400 Sobic002G230400 Sobic003G055200--Sobic002G230400 Sobic004G163700 Sobic004G163700 Sobic003G055200--Sobic004G163700 Sobic002G174500 Sobic002G174500 Sobic003G055200--Sobic002G174500 Sobic007G086701 Sobic007G086701 Sobic003G055200--Sobic007G086701 Sobic003G055200--Sobic006G257600 Sobic002G315100--Sobic002G354800 Sobic006G091850 Sobic006G091850 Sobic002G315100--Sobic006G091850 Sobic005G160200 Sobic005G160200 Sobic002G315100--Sobic005G160200 Sobic002G315100--Sobic003G055200 Sobic002G315100--Sobic002G230400 Sobic004G014100 Sobic004G014100 Sobic002G315100--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G315100--Sobic006G143300 Sobic002G315100--Sobic009G069200 Sobic006G184200 Sobic006G184200 Sobic002G315100--Sobic006G184200 Sobic002G354800--Sobic002G230400 Sobic002G354800--Sobic002G315100 Sobic002G354800--Sobic006G184200 Sobic002G349000 Sobic002G349000 Sobic002G354800--Sobic002G349000 Sobic001G081800 Sobic001G081800 Sobic002G354800--Sobic001G081800 Sobic002G354800--Sobic004G014100 Sobic002G354800--Sobic006G143300 Sobic002G354800--Sobic003G055200 Sobic002G354800--Sobic001G278700 Sobic008G160600 Sobic008G160600 Sobic010G223500--Sobic008G160600 Sobic003G062101 Sobic003G062101 Sobic010G223500--Sobic003G062101 Sobic010G223500--Sobic006G184200 Sobic006G100266 Sobic006G100266 Sobic010G223500--Sobic006G100266 Sobic003G042200 Sobic003G042200 Sobic010G223500--Sobic003G042200 Sobic008G174500 Sobic008G174500 Sobic010G223500--Sobic008G174500 Sobic010G009600 Sobic010G009600 Sobic010G223500--Sobic010G009600 Sobic001G194100 Sobic001G194100 Sobic010G223500--Sobic001G194100 Sobic010G038900 Sobic010G038900 Sobic010G223500--Sobic010G038900 Sobic009G069200--Sobic009G113100 Sobic003G415100 Sobic003G415100 Sobic009G069200--Sobic003G415100 Sobic009G069200--Sobic010G038900 Sobic002G390400 Sobic002G390400 Sobic009G069200--Sobic002G390400 Sobic009G069200--Sobic005G198200 Sobic009G069200--Sobic002G315100 Sobic009G069200--Sobic001G090300 Sobic009G069200--Sobic005G160200 Sobic008G045800 Sobic008G045800 Sobic009G069200--Sobic008G045800 Sobic003G004600 Sobic003G004600 Sobic002G306600--Sobic003G004600 Sobic010G059700 Sobic010G059700 Sobic002G306600--Sobic010G059700 Sobic001G458200 Sobic001G458200 Sobic002G306600--Sobic001G458200 Sobic003G128300 Sobic003G128300 Sobic002G306600--Sobic003G128300 Sobic001G157600 Sobic001G157600 Sobic002G306600--Sobic001G157600 Sobic003G221500 Sobic003G221500 Sobic002G306600--Sobic003G221500 Sobic002G267400 Sobic002G267400 Sobic002G306600--Sobic002G267400 Sobic001G487100 Sobic001G487100 Sobic002G306600--Sobic001G487100 Sobic004G088700 Sobic004G088700 Sobic002G306600--Sobic004G088700 Sobic006G015500--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic006G015500--Sobic004G075700 Sobic008G164700 Sobic008G164700 Sobic006G015500--Sobic008G164700 Sobic006G179400 Sobic006G179400 Sobic006G015500--Sobic006G179400 Sobic006G015500--Sobic001G278700 Sobic009G132600 Sobic009G132600 Sobic006G015500--Sobic009G132600 Sobic009G060300 Sobic009G060300 Sobic006G015500--Sobic009G060300 Sobic006G015500--Sobic009G113100 Sobic006G015500--Sobic006G257600 Sobic003G284700--Sobic001G278700 Sobic003G284700--Sobic003G055200 Sobic006G210700 Sobic006G210700 Sobic003G284700--Sobic006G210700 Sobic010G273800 Sobic010G273800 Sobic003G284700--Sobic010G273800 Sobic003G284700--Sobic006G257600 Sobic004G160700 Sobic004G160700 Sobic003G284700--Sobic004G160700 Sobic003G284700--Sobic002G354800 Sobic002G104300 Sobic002G104300 Sobic003G284700--Sobic002G104300 Sobic004G340566 Sobic004G340566 Sobic003G284700--Sobic004G340566
Octagon: transcription factors


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