Gene annotation
Transcriptome id Sobic.003G004600.1
Synonym WIT1, Sb03g000580
Functional annotation expressed protein
UniProt A0A1W0VV96
Pfam -
Panther DB PTHR35705 PTHR35705:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11390 : WPP domain-interacting protein 1
RAP-DB (Rice) LOC_Os05g15140.1 : expressed protein
MaizeGDB (Corn) Zm00025a022798
Brachypodium KQK03471
Barley HORVU3Hr1G057330.3 , HORVU3Hr1G057330.2 , HORVU3Hr1G057330.1 , HORVU7Hr1G007940.11 , HORVU7Hr1G007940.10 , HORVU7Hr1G007940.13 , HORVU7Hr1G007940.12 , HORVU7Hr1G007940.9 , HORVU7Hr1G007940.8 , HORVU7Hr1G007940.5 , HORVU7Hr1G007940.4 , HORVU7Hr1G007940.7 , HORVU7Hr1G007940.6
Wheat TraesCS7D02G038700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
2 Sobic.003G221500 CENP-C1, putative, expressed -
3 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
4 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
5 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
6 Sobic.004G063300 expressed protein -
7 Sobic.003G010900 expressed protein -
8 Sobic.003G132000 proteasome subunit, putative, expressed K12176: COPS2, CSN2, COP9 signalosome complex subunit 2
9 Sobic.003G128300 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed K10686: UBE1C, ubiquitin-activating enzyme E1 C
10 Sobic.004G350200 KH domain containing protein, putative, expressed K14944: RNA-binding protein Nova
11 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
12 Sobic.004G160700 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
13 Sobic.007G081900 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
14 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
15 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
16 Sobic.001G229300 expressed protein -
17 Sobic.004G320100 expressed protein -
18 Sobic.001G487100 RNA recognition motif containing protein, putative, expressed -
19 Sobic.010G038900 expressed protein -
20 Sobic.003G129300 uridine kinase, putative, expressed -


Gene co-expression network
sample Sobic003G004600 Sobic003G004600 Sobic002G306600 Sobic002G306600 Sobic003G004600--Sobic002G306600 Sobic003G221500 Sobic003G221500 Sobic003G004600--Sobic003G221500 Sobic004G256300 Sobic004G256300 Sobic003G004600--Sobic004G256300 Sobic003G222700 Sobic003G222700 Sobic003G004600--Sobic003G222700 Sobic007G148400 Sobic007G148400 Sobic003G004600--Sobic007G148400 Sobic004G063300 Sobic004G063300 Sobic003G004600--Sobic004G063300 Sobic003G010900 Sobic003G010900 Sobic003G004600--Sobic003G010900 Sobic003G132000 Sobic003G132000 Sobic003G004600--Sobic003G132000 Sobic003G128300 Sobic003G128300 Sobic003G004600--Sobic003G128300 Sobic002G306600--Sobic003G004600 Sobic010G059700 Sobic010G059700 Sobic002G306600--Sobic010G059700 Sobic001G458200 Sobic001G458200 Sobic002G306600--Sobic001G458200 Sobic002G306600--Sobic003G128300 Sobic001G157600 Sobic001G157600 Sobic002G306600--Sobic001G157600 Sobic002G306600--Sobic003G221500 Sobic002G267400 Sobic002G267400 Sobic002G306600--Sobic002G267400 Sobic001G487100 Sobic001G487100 Sobic002G306600--Sobic001G487100 Sobic004G088700 Sobic004G088700 Sobic002G306600--Sobic004G088700 Sobic003G221500--Sobic004G256300 Sobic002G142700 Sobic002G142700 Sobic003G221500--Sobic002G142700 Sobic003G221500--Sobic003G004600 Sobic010G236200 Sobic010G236200 Sobic003G221500--Sobic010G236200 Sobic001G462600 Sobic001G462600 Sobic003G221500--Sobic001G462600 Sobic006G245700 Sobic006G245700 Sobic003G221500--Sobic006G245700 Sobic009G032200 Sobic009G032200 Sobic003G221500--Sobic009G032200 Sobic010G154000 Sobic010G154000 Sobic003G221500--Sobic010G154000 Sobic003G221500--Sobic003G222700 Sobic004G256300--Sobic003G221500 Sobic004G256300--Sobic003G222700 Sobic004G256300--Sobic006G245700 Sobic007G022700 Sobic007G022700 Sobic004G256300--Sobic007G022700 Sobic001G229300 Sobic001G229300 Sobic004G256300--Sobic001G229300 Sobic004G256300--Sobic002G142700 Sobic004G256300--Sobic001G487100 Sobic001G467100 Sobic001G467100 Sobic004G256300--Sobic001G467100 Sobic004G256300--Sobic003G004600 Sobic003G222700--Sobic004G256300 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic003G222700--Sobic001G229300 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic007G218600 Sobic007G218600 Sobic007G148400--Sobic007G218600 Sobic003G308300 Sobic003G308300 Sobic007G148400--Sobic003G308300 Sobic006G222500 Sobic006G222500 Sobic007G148400--Sobic006G222500 Sobic009G186700 Sobic009G186700 Sobic007G148400--Sobic009G186700 Sobic001G050500 Sobic001G050500 Sobic007G148400--Sobic001G050500 Sobic007G146600 Sobic007G146600 Sobic007G148400--Sobic007G146600 Sobic003G255700 Sobic003G255700 Sobic007G148400--Sobic003G255700 Sobic001G305900 Sobic001G305900 Sobic007G148400--Sobic001G305900 Sobic002G276800 Sobic002G276800 Sobic007G148400--Sobic002G276800 Sobic010G038900 Sobic010G038900 Sobic004G063300--Sobic010G038900 Sobic009G008200 Sobic009G008200 Sobic004G063300--Sobic009G008200 Sobic002G066800 Sobic002G066800 Sobic004G063300--Sobic002G066800 Sobic004G350200 Sobic004G350200 Sobic004G063300--Sobic004G350200 Sobic002G141200 Sobic002G141200 Sobic004G063300--Sobic002G141200 Sobic007G034200 Sobic007G034200 Sobic004G063300--Sobic007G034200 Sobic002G322400 Sobic002G322400 Sobic004G063300--Sobic002G322400 Sobic001G051400 Sobic001G051400 Sobic004G063300--Sobic001G051400 Sobic002G274700 Sobic002G274700 Sobic004G063300--Sobic002G274700 Sobic003G010900--Sobic001G051400 Sobic004G145600 Sobic004G145600 Sobic003G010900--Sobic004G145600 Sobic003G010900--Sobic002G066800 Sobic007G016900 Sobic007G016900 Sobic003G010900--Sobic007G016900 Sobic001G123600 Sobic001G123600 Sobic003G010900--Sobic001G123600 Sobic004G084400 Sobic004G084400 Sobic003G010900--Sobic004G084400 Sobic003G010900--Sobic001G229300 Sobic003G432800 Sobic003G432800 Sobic003G010900--Sobic003G432800 Sobic002G381900 Sobic002G381900 Sobic003G010900--Sobic002G381900 Sobic001G114500 Sobic001G114500 Sobic003G132000--Sobic001G114500 Sobic006G270600 Sobic006G270600 Sobic003G132000--Sobic006G270600 Sobic003G046300 Sobic003G046300 Sobic003G132000--Sobic003G046300 Sobic008G103300 Sobic008G103300 Sobic003G132000--Sobic008G103300 Sobic003G132000--Sobic001G487100 Sobic004G192900 Sobic004G192900 Sobic003G132000--Sobic004G192900 Sobic009G164000 Sobic009G164000 Sobic003G132000--Sobic009G164000 Sobic002G371700 Sobic002G371700 Sobic003G132000--Sobic002G371700 Sobic003G363700 Sobic003G363700 Sobic003G132000--Sobic003G363700 Sobic003G128300--Sobic003G132000 Sobic003G128300--Sobic001G458200 Sobic003G128300--Sobic001G487100 Sobic003G148900 Sobic003G148900 Sobic003G128300--Sobic003G148900 Sobic004G320100 Sobic004G320100 Sobic003G128300--Sobic004G320100 Sobic003G128300--Sobic003G046300 Sobic003G128300--Sobic002G306600 Sobic003G128300--Sobic008G103300 Sobic009G258400 Sobic009G258400 Sobic003G128300--Sobic009G258400
Octagon: transcription factors


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