Gene annotation
Transcriptome id Sobic.003G284700.1
Synonym ATTPS7, TPS7, Sb03g033590, ATTPSA
Functional annotation trehalose synthase, putative, expressed
UniProt C5XJ13
Pfam PF02358 PF00982
Panther DB PTHR10788 PTHR10788:SF22
NCBI CDD -
KEGG Orthology K16055; trehalose 6-phosphate synthase/phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G06410 : trehalose-phosphatase/synthase 7
RAP-DB (Rice) LOC_Os01g53000.1 : trehalose synthase, putative, expressed
MaizeGDB (Corn) Zm00025a039015
Brachypodium PNT65386 , KQJ92080
Barley HORVU5Hr1G036360.4 , HORVU5Hr1G036360.3 , HORVU5Hr1G036360.2 , HORVU5Hr1G036360.1 , HORVU1Hr1G076480.3 , HORVU1Hr1G076480.1 , HORVU3Hr1G071570.4 , HORVU3Hr1G071570.1 , HORVU3Hr1G071570.3 , HORVU3Hr1G071570.2 , HORVU3Hr1G071570.5 , HORVU3Hr1G071570.6
Wheat TraesCS3D02G289100 , TraesCS3D02G289100 , TraesCS5D02G129600 , TraesCS3D02G289100 , TraesCS5A02G116500 , TraesCS3A02G289300 , TraesCS3B02G323900 , TraesCS1A02G338200 , TraesCS5B02G117800 , TraesCS1D02G340400 , TraesCS3B02G323900
Populus -


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cDNA sequences
Sobic.003G284700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G278700 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
2 Sobic.003G055200 expressed protein -
3 Sobic.006G210700 potassium transporter, putative, expressed -
4 Sobic.010G273800 "starch biosynthesis, 1,4-alpha-glucan branching enzyme"(PubMedID : 21853065)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
5 Sobic.006G257600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05609: UCHL3, ubiquitin carboxyl-terminal hydrolase L3
6 Sobic.004G160700 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
7 Sobic.002G354800 zinc finger family protein, putative, expressed -
8 Sobic.002G104300 FAS1, putative, expressed K10750: chromatin assembly factor 1 subunit A
9 Sobic.004G340566 - -
10 Sobic.003G255700 ubiquitin-conjugating enzyme domain containing protein, expressed K10581: ubiquitin-conjugating enzyme E2 O
11 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
12 Sobic.002G315100 expressed protein K15083: DNA repair protein RAD16
13 Sobic.001G452100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
14 Sobic.009G069200 glycine-rich protein, putative, expressed -
15 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.002G076500 protein Kinase-associated protein phosphatase, putative, expressed K01090: protein phosphatase
17 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
18 Sobic.009G156200 starch binding domain containing protein, putative, expressed -
19 Sobic.004G163700 "1,4-alpha-glucan-branching enzyme 2"(PubMedID : 26186930)@"1,4-alpha-glucan branching enzyme IIB (Zm)"(PubMedID : 27208977)@Starch synthesis(PubMedID : 31624872)@"SbeIIb(Ortholog in maize:Jiang et al., 2013)"(PubMedID : 31659883)@1,4-alpha-glucan-branching enzyme, chloroplast precursor, putative, expressed K00700: GBE1, 1,4-alpha-glucan branching enzyme
20 Sobic.001G524000 CBS domain containing protein, expressed K16302: metal transporter CNNM


Gene co-expression network
sample Sobic003G284700 Sobic003G284700 Sobic001G278700 Sobic001G278700 Sobic003G284700--Sobic001G278700 Sobic003G055200 Sobic003G055200 Sobic003G284700--Sobic003G055200 Sobic006G210700 Sobic006G210700 Sobic003G284700--Sobic006G210700 Sobic010G273800 Sobic010G273800 Sobic003G284700--Sobic010G273800 Sobic006G257600 Sobic006G257600 Sobic003G284700--Sobic006G257600 Sobic004G160700 Sobic004G160700 Sobic003G284700--Sobic004G160700 Sobic002G354800 Sobic002G354800 Sobic003G284700--Sobic002G354800 Sobic002G104300 Sobic002G104300 Sobic003G284700--Sobic002G104300 Sobic004G340566 Sobic004G340566 Sobic003G284700--Sobic004G340566 Sobic004G075700 Sobic004G075700 Sobic001G278700--Sobic004G075700 Sobic006G015800 Sobic006G015800 Sobic001G278700--Sobic006G015800 Sobic001G278700--Sobic010G273800 Sobic001G278700--Sobic002G354800 Sobic007G150700 Sobic007G150700 Sobic001G278700--Sobic007G150700 Sobic002G230400 Sobic002G230400 Sobic001G278700--Sobic002G230400 Sobic001G278700--Sobic003G055200 Sobic004G163700 Sobic004G163700 Sobic001G278700--Sobic004G163700 Sobic006G161300 Sobic006G161300 Sobic001G278700--Sobic006G161300 Sobic003G055200--Sobic002G354800 Sobic010G207900 Sobic010G207900 Sobic003G055200--Sobic010G207900 Sobic002G315100 Sobic002G315100 Sobic003G055200--Sobic002G315100 Sobic003G055200--Sobic001G278700 Sobic003G055200--Sobic002G230400 Sobic003G055200--Sobic004G163700 Sobic002G174500 Sobic002G174500 Sobic003G055200--Sobic002G174500 Sobic007G086701 Sobic007G086701 Sobic003G055200--Sobic007G086701 Sobic003G055200--Sobic006G257600 Sobic001G114200 Sobic001G114200 Sobic006G210700--Sobic001G114200 Sobic009G166600 Sobic009G166600 Sobic006G210700--Sobic009G166600 Sobic006G128100 Sobic006G128100 Sobic006G210700--Sobic006G128100 Sobic009G186700 Sobic009G186700 Sobic006G210700--Sobic009G186700 Sobic010G169900 Sobic010G169900 Sobic006G210700--Sobic010G169900 Sobic002G313900 Sobic002G313900 Sobic006G210700--Sobic002G313900 Sobic007G148400 Sobic007G148400 Sobic006G210700--Sobic007G148400 Sobic002G076500 Sobic002G076500 Sobic006G210700--Sobic002G076500 Sobic001G490900 Sobic001G490900 Sobic006G210700--Sobic001G490900 Sobic010G273800--Sobic006G015800 Sobic003G092600 Sobic003G092600 Sobic010G273800--Sobic003G092600 Sobic004G262100 Sobic004G262100 Sobic010G273800--Sobic004G262100 Sobic001G324800 Sobic001G324800 Sobic010G273800--Sobic001G324800 Sobic010G093400 Sobic010G093400 Sobic010G273800--Sobic010G093400 Sobic002G015800 Sobic002G015800 Sobic010G273800--Sobic002G015800 Sobic009G207500 Sobic009G207500 Sobic010G273800--Sobic009G207500 Sobic001G425900 Sobic001G425900 Sobic010G273800--Sobic001G425900 Sobic004G294100 Sobic004G294100 Sobic010G273800--Sobic004G294100 Sobic009G113100 Sobic009G113100 Sobic006G257600--Sobic009G113100 Sobic006G257600--Sobic003G055200 Sobic006G257600--Sobic002G315100 Sobic006G257600--Sobic002G354800 Sobic010G223500 Sobic010G223500 Sobic006G257600--Sobic010G223500 Sobic009G069200 Sobic009G069200 Sobic006G257600--Sobic009G069200 Sobic002G306600 Sobic002G306600 Sobic006G257600--Sobic002G306600 Sobic006G015500 Sobic006G015500 Sobic006G257600--Sobic006G015500 Sobic006G257600--Sobic003G284700 Sobic005G197100 Sobic005G197100 Sobic004G160700--Sobic005G197100 Sobic003G004500 Sobic003G004500 Sobic004G160700--Sobic003G004500 Sobic007G018200 Sobic007G018200 Sobic004G160700--Sobic007G018200 Sobic004G160700--Sobic009G166600 Sobic005G114800 Sobic005G114800 Sobic004G160700--Sobic005G114800 Sobic001G524000 Sobic001G524000 Sobic004G160700--Sobic001G524000 Sobic008G160500 Sobic008G160500 Sobic004G160700--Sobic008G160500 Sobic002G322400 Sobic002G322400 Sobic004G160700--Sobic002G322400 Sobic004G160700--Sobic006G257600 Sobic002G354800--Sobic002G230400 Sobic002G354800--Sobic002G315100 Sobic006G184200 Sobic006G184200 Sobic002G354800--Sobic006G184200 Sobic002G349000 Sobic002G349000 Sobic002G354800--Sobic002G349000 Sobic001G081800 Sobic001G081800 Sobic002G354800--Sobic001G081800 Sobic004G014100 Sobic004G014100 Sobic002G354800--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G354800--Sobic006G143300 Sobic002G354800--Sobic003G055200 Sobic002G354800--Sobic001G278700 Sobic001G083900 Sobic001G083900 Sobic002G104300--Sobic001G083900 Sobic002G104300--Sobic001G425900 Sobic002G104300--Sobic004G163700 Sobic004G339900 Sobic004G339900 Sobic002G104300--Sobic004G339900 Sobic002G104300--Sobic010G273800 Sobic002G104300--Sobic001G278700 Sobic004G065850 Sobic004G065850 Sobic002G104300--Sobic004G065850 Sobic002G420400 Sobic002G420400 Sobic002G104300--Sobic002G420400 Sobic004G200400 Sobic004G200400 Sobic002G104300--Sobic004G200400 Sobic009G132400 Sobic009G132400 Sobic004G340566--Sobic009G132400 Sobic002G099866 Sobic002G099866 Sobic004G340566--Sobic002G099866 Sobic003G101200 Sobic003G101200 Sobic004G340566--Sobic003G101200 Sobic001G509100 Sobic001G509100 Sobic004G340566--Sobic001G509100 Sobic004G340566--Sobic001G324800 Sobic004G340566--Sobic004G262100 Sobic009G234500 Sobic009G234500 Sobic004G340566--Sobic009G234500 Sobic001G452100 Sobic001G452100 Sobic004G340566--Sobic001G452100 Sobic002G266600 Sobic002G266600 Sobic004G340566--Sobic002G266600
Octagon: transcription factors


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