Gene annotation
Transcriptome id Sobic.004G340566.1
Synonym -
Functional annotation -
UniProt A0A194YT22
Pfam PF14299
Panther DB PTHR32278 PTHR32278:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02230 : phloem protein 2-B1
RAP-DB (Rice) LOC_Os02g56840.1 : OsFBX70 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G132400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@microtubule associated protein, putative, expressed -
2 Sobic.002G099866 - -
3 Sobic.003G101200 paired amphipathic helix repeat-containing protein, putative, expressed -
4 Sobic.001G509100 expressed protein -
5 Sobic.001G324800 cysteine proteinase inhibitor 8 precursor, putative, expressed -
6 Sobic.004G262100 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
7 Sobic.009G234500 similar to Cold acclimation protein COR413-TM1(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cold acclimation protein WCOR413, putative, expressed -
8 Sobic.001G452100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
9 Sobic.002G266600 - K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
10 Sobic.009G156200 starch binding domain containing protein, putative, expressed -
11 Sobic.002G015800 OsFBD13 - F-box and FBD domain containing protein, expressed -
12 Sobic.010G193700 expressed protein -
13 Sobic.002G349000 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
14 Sobic.002G100600 ubiquitin family protein, putative, expressed -
15 Sobic.003G092600 seven in absentia protein family protein, expressed -
16 Sobic.003G167200 - -
17 Sobic.003G035001 - -
18 Sobic.001G261529 - -
19 Sobic.002G360900 GASR9 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
20 Sobic.001G264600 - -


Gene co-expression network
sample Sobic004G340566 Sobic004G340566 Sobic009G132400 Sobic009G132400 Sobic004G340566--Sobic009G132400 Sobic002G099866 Sobic002G099866 Sobic004G340566--Sobic002G099866 Sobic003G101200 Sobic003G101200 Sobic004G340566--Sobic003G101200 Sobic001G509100 Sobic001G509100 Sobic004G340566--Sobic001G509100 Sobic001G324800 Sobic001G324800 Sobic004G340566--Sobic001G324800 Sobic004G262100 Sobic004G262100 Sobic004G340566--Sobic004G262100 Sobic009G234500 Sobic009G234500 Sobic004G340566--Sobic009G234500 Sobic001G452100 Sobic001G452100 Sobic004G340566--Sobic001G452100 Sobic002G266600 Sobic002G266600 Sobic004G340566--Sobic002G266600 Sobic009G132400--Sobic002G099866 Sobic009G132400--Sobic002G266600 Sobic009G132400--Sobic001G509100 Sobic009G132400--Sobic004G340566 Sobic003G167200 Sobic003G167200 Sobic009G132400--Sobic003G167200 Sobic001G264600 Sobic001G264600 Sobic009G132400--Sobic001G264600 Sobic001G261529 Sobic001G261529 Sobic009G132400--Sobic001G261529 Sobic003G035001 Sobic003G035001 Sobic009G132400--Sobic003G035001 Sobic009G132400--Sobic001G324800 Sobic002G099866--Sobic002G266600 Sobic002G099866--Sobic001G509100 Sobic002G099866--Sobic009G132400 Sobic002G099866--Sobic001G264600 Sobic002G099866--Sobic003G167200 Sobic002G099866--Sobic001G261529 Sobic002G099866--Sobic003G035001 Sobic002G015800 Sobic002G015800 Sobic002G099866--Sobic002G015800 Sobic007G086701 Sobic007G086701 Sobic002G099866--Sobic007G086701 Sobic005G083160 Sobic005G083160 Sobic003G101200--Sobic005G083160 Sobic010G107300 Sobic010G107300 Sobic003G101200--Sobic010G107300 Sobic009G218100 Sobic009G218100 Sobic003G101200--Sobic009G218100 Sobic003G101200--Sobic002G015800 Sobic003G101200--Sobic001G509100 Sobic003G101200--Sobic002G099866 Sobic003G101200--Sobic004G262100 Sobic002G360900 Sobic002G360900 Sobic003G101200--Sobic002G360900 Sobic010G022600 Sobic010G022600 Sobic003G101200--Sobic010G022600 Sobic001G509100--Sobic002G099866 Sobic001G509100--Sobic002G015800 Sobic003G092600 Sobic003G092600 Sobic001G509100--Sobic003G092600 Sobic001G509100--Sobic003G035001 Sobic001G509100--Sobic004G262100 Sobic001G509100--Sobic002G266600 Sobic001G509100--Sobic001G261529 Sobic001G509100--Sobic009G132400 Sobic001G509100--Sobic003G101200 Sobic001G324800--Sobic003G092600 Sobic001G394900 Sobic001G394900 Sobic001G324800--Sobic001G394900 Sobic001G324800--Sobic002G015800 Sobic001G324800--Sobic002G360900 Sobic001G324800--Sobic004G262100 Sobic006G015800 Sobic006G015800 Sobic001G324800--Sobic006G015800 Sobic001G324800--Sobic010G022600 Sobic001G324800--Sobic001G509100 Sobic001G324800--Sobic010G107300 Sobic004G262100--Sobic002G015800 Sobic004G262100--Sobic003G092600 Sobic004G262100--Sobic001G324800 Sobic004G262100--Sobic001G509100 Sobic004G262100--Sobic002G360900 Sobic004G262100--Sobic001G261529 Sobic005G083280 Sobic005G083280 Sobic004G262100--Sobic005G083280 Sobic004G262100--Sobic003G101200 Sobic004G262100--Sobic010G022600 Sobic009G234500--Sobic001G261529 Sobic009G234500--Sobic002G266600 Sobic009G234500--Sobic002G099866 Sobic009G234500--Sobic002G015800 Sobic009G234500--Sobic001G264600 Sobic009G234500--Sobic001G509100 Sobic009G234500--Sobic003G035001 Sobic009G234500--Sobic003G092600 Sobic009G234500--Sobic005G083280 Sobic001G452100--Sobic003G035001 Sobic001G452100--Sobic003G101200 Sobic001G452100--Sobic002G266600 Sobic001G452100--Sobic001G509100 Sobic001G452100--Sobic002G099866 Sobic001G452100--Sobic003G167200 Sobic001G452100--Sobic002G015800 Sobic001G452100--Sobic001G261529 Sobic001G452100--Sobic009G132400 Sobic002G266600--Sobic001G264600 Sobic002G266600--Sobic002G099866 Sobic002G266600--Sobic003G167200 Sobic002G266600--Sobic007G086701 Sobic002G266600--Sobic001G261529 Sobic002G266600--Sobic003G035001 Sobic002G066700 Sobic002G066700 Sobic002G266600--Sobic002G066700 Sobic006G018751 Sobic006G018751 Sobic002G266600--Sobic006G018751 Sobic002G266600--Sobic005G083280
Octagon: transcription factors


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