Gene annotation
Transcriptome id Sobic.003G092600.2,Sobic.003G092600.4,Sobic.003G092600.6,Sobic.003G092600.3,Sobic.003G092600.1,Sobic.003G092600.5
Synonym
Functional annotation seven in absentia protein family protein, expressed
UniProt A0A1W0VWH6 , A0A1B6Q280 , A0A1W0VWD7 , A0A1W0VWD6
Pfam PF03145
Panther DB PTHR10315 PTHR10315:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007275; multicellular organism development GO:0006511ubiquitin-dependent protein catabolic process GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G37870 : Protein with RING/U-box and TRAF-like domains
RAP-DB (Rice) LOC_Os01g03170.1 : seven in absentia protein family protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G015800 OsFBD13 - F-box and FBD domain containing protein, expressed -
2 Sobic.005G083280 - -
3 Sobic.001G261529 - -
4 Sobic.004G322901 - -
5 Sobic.009G014900 expressed protein -
6 Sobic.006G015800 "1,4-alpha-glucan branching enzyme/starch branching enzyme II, PULLULANASE 1, CHLOROPLASTIC"(PubMedID : 21853065)@Alpha amylase, catalytic domain containing protein, expressed -
7 Sobic.004G262100 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed K00021: hydroxymethylglutaryl-CoA reductase (NADPH)
8 Sobic.001G324800 cysteine proteinase inhibitor 8 precursor, putative, expressed -
9 Sobic.001G509100 expressed protein -
10 Sobic.004G139700 OsSCP7 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
11 Sobic.004G294100 ZOS2-14 - C2H2 zinc finger protein, expressed -
12 Sobic.001G175501 - -
13 Sobic.004G212350 - -
14 Sobic.010G022600 encodes granule-bound ADP-glucose-gluosyl transferase(PubMedID : 20585750)@-(PubMedID : 9866201)@starch synthase, putative, expressed K13679: granule-bound starch synthase
15 Sobic.003G214650 - -
16 Sobic.007G204350 - -
17 Sobic.010G107300 - -
18 Sobic.004G099750 - -
19 Sobic.002G099866 - -
20 Sobic.005G021100 - -


Gene co-expression network
sample Sobic003G092600 Sobic003G092600 Sobic002G015800 Sobic002G015800 Sobic003G092600--Sobic002G015800 Sobic005G083280 Sobic005G083280 Sobic003G092600--Sobic005G083280 Sobic001G261529 Sobic001G261529 Sobic003G092600--Sobic001G261529 Sobic004G322901 Sobic004G322901 Sobic003G092600--Sobic004G322901 Sobic009G014900 Sobic009G014900 Sobic003G092600--Sobic009G014900 Sobic006G015800 Sobic006G015800 Sobic003G092600--Sobic006G015800 Sobic004G262100 Sobic004G262100 Sobic003G092600--Sobic004G262100 Sobic001G324800 Sobic001G324800 Sobic003G092600--Sobic001G324800 Sobic001G509100 Sobic001G509100 Sobic003G092600--Sobic001G509100 Sobic002G015800--Sobic003G092600 Sobic002G015800--Sobic001G261529 Sobic002G015800--Sobic005G083280 Sobic002G015800--Sobic004G262100 Sobic002G015800--Sobic001G509100 Sobic002G015800--Sobic001G324800 Sobic010G022600 Sobic010G022600 Sobic002G015800--Sobic010G022600 Sobic010G107300 Sobic010G107300 Sobic002G015800--Sobic010G107300 Sobic002G015800--Sobic004G322901 Sobic005G083280--Sobic001G261529 Sobic005G083280--Sobic004G322901 Sobic005G083280--Sobic003G092600 Sobic005G083280--Sobic002G015800 Sobic001G264600 Sobic001G264600 Sobic005G083280--Sobic001G264600 Sobic006G018751 Sobic006G018751 Sobic005G083280--Sobic006G018751 Sobic005G083280--Sobic006G015800 Sobic007G086701 Sobic007G086701 Sobic005G083280--Sobic007G086701 Sobic005G083280--Sobic009G014900 Sobic001G261529--Sobic005G083280 Sobic001G261529--Sobic004G322901 Sobic001G261529--Sobic001G264600 Sobic001G261529--Sobic003G092600 Sobic001G261529--Sobic002G015800 Sobic002G266600 Sobic002G266600 Sobic001G261529--Sobic002G266600 Sobic001G261529--Sobic007G086701 Sobic001G261529--Sobic006G018751 Sobic002G099866 Sobic002G099866 Sobic001G261529--Sobic002G099866 Sobic004G322901--Sobic005G083280 Sobic004G322901--Sobic001G261529 Sobic004G322901--Sobic003G092600 Sobic004G322901--Sobic009G014900 Sobic004G322901--Sobic006G015800 Sobic007G126000 Sobic007G126000 Sobic004G322901--Sobic007G126000 Sobic002G147466 Sobic002G147466 Sobic004G322901--Sobic002G147466 Sobic004G322901--Sobic006G018751 Sobic004G322901--Sobic002G015800 Sobic009G014900--Sobic003G092600 Sobic009G014900--Sobic004G322901 Sobic009G014900--Sobic002G147466 Sobic003G325800 Sobic003G325800 Sobic009G014900--Sobic003G325800 Sobic009G014900--Sobic006G015800 Sobic003G414000 Sobic003G414000 Sobic009G014900--Sobic003G414000 Sobic009G014900--Sobic005G083280 Sobic002G267700 Sobic002G267700 Sobic009G014900--Sobic002G267700 Sobic003G091500 Sobic003G091500 Sobic009G014900--Sobic003G091500 Sobic006G015800--Sobic003G092600 Sobic004G212350 Sobic004G212350 Sobic006G015800--Sobic004G212350 Sobic005G082300 Sobic005G082300 Sobic006G015800--Sobic005G082300 Sobic002G172200 Sobic002G172200 Sobic006G015800--Sobic002G172200 Sobic002G100000 Sobic002G100000 Sobic006G015800--Sobic002G100000 Sobic006G015800--Sobic004G322901 Sobic001G371600 Sobic001G371600 Sobic006G015800--Sobic001G371600 Sobic005G032500 Sobic005G032500 Sobic006G015800--Sobic005G032500 Sobic001G489075 Sobic001G489075 Sobic006G015800--Sobic001G489075 Sobic004G262100--Sobic002G015800 Sobic004G262100--Sobic003G092600 Sobic004G262100--Sobic001G324800 Sobic004G262100--Sobic001G509100 Sobic002G360900 Sobic002G360900 Sobic004G262100--Sobic002G360900 Sobic004G262100--Sobic001G261529 Sobic004G262100--Sobic005G083280 Sobic003G101200 Sobic003G101200 Sobic004G262100--Sobic003G101200 Sobic004G262100--Sobic010G022600 Sobic001G324800--Sobic003G092600 Sobic001G394900 Sobic001G394900 Sobic001G324800--Sobic001G394900 Sobic001G324800--Sobic002G015800 Sobic001G324800--Sobic002G360900 Sobic001G324800--Sobic004G262100 Sobic001G324800--Sobic006G015800 Sobic001G324800--Sobic010G022600 Sobic001G324800--Sobic001G509100 Sobic001G324800--Sobic010G107300 Sobic001G509100--Sobic002G099866 Sobic001G509100--Sobic002G015800 Sobic001G509100--Sobic003G092600 Sobic003G035001 Sobic003G035001 Sobic001G509100--Sobic003G035001 Sobic001G509100--Sobic004G262100 Sobic001G509100--Sobic002G266600 Sobic001G509100--Sobic001G261529 Sobic009G132400 Sobic009G132400 Sobic001G509100--Sobic009G132400 Sobic001G509100--Sobic003G101200
Octagon: transcription factors


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