Gene annotation
Transcriptome id Sobic.004G354200.5,Sobic.004G354200.6
Synonym Sb04g038090
Functional annotation expressed protein
UniProt A0A1Z5RQG7 , A0A1Z5RQF1
Pfam PF03097
Panther DB PTHR23032 PTHR23032:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17940 : Endosomal targeting BRO1-like domain-containing protein
RAP-DB (Rice) LOC_Os02g58160.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G093850.31 , HORVU6Hr1G093850.30 , HORVU6Hr1G093850.33 , HORVU6Hr1G093850.32 , HORVU6Hr1G093850.35 , HORVU6Hr1G093850.34 , HORVU6Hr1G093850.37 , HORVU6Hr1G093850.36 , HORVU6Hr1G093850.39 , HORVU6Hr1G093850.38 , HORVU6Hr1G093850.26 , HORVU6Hr1G093850.27 , HORVU6Hr1G093850.24 , HORVU6Hr1G093850.25 , HORVU6Hr1G093850.23 , HORVU6Hr1G093850.20 , HORVU6Hr1G093850.21 , HORVU6Hr1G093850.28 , HORVU6Hr1G093850.29 , HORVU6Hr1G093850.7 , HORVU6Hr1G093850.6 , HORVU6Hr1G093850.5 , HORVU6Hr1G093850.4 , HORVU6Hr1G093850.3 , HORVU6Hr1G093850.2 , HORVU6Hr1G093850.9 , HORVU6Hr1G093850.40 , HORVU6Hr1G093850.41 , HORVU6Hr1G093850.42 , HORVU6Hr1G093850.43 , HORVU6Hr1G093850.44 , HORVU6Hr1G093850.45 , HORVU6Hr1G093850.19 , HORVU6Hr1G093850.18 , HORVU6Hr1G093850.17 , HORVU6Hr1G093850.16 , HORVU6Hr1G093850.15 , HORVU6Hr1G093850.14 , HORVU6Hr1G093850.13 , HORVU6Hr1G093850.12 , HORVU6Hr1G093850.11 , HORVU6Hr1G093850.10
Wheat TraesCSU02G083200 , TraesCS7D02G320700 , TraesCS6B02G461300 , TraesCS6D02G396400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
2 Sobic.008G011200 STE_PAK_Ste20_STLK.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
3 Sobic.010G176550 - -
4 Sobic.002G127550 - -
5 Sobic.006G030400 xa21, putative, expressed -
6 Sobic.001G433000 FAR1 family protein, expressed -
7 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase
8 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
9 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
10 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
11 Sobic.001G261573 - -
12 Sobic.001G534066 - -
13 Sobic.002G168300 RGH2B, putative, expressed -
14 Sobic.003G442700 - -
15 Sobic.006G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
16 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
17 Sobic.001G159400 protein kinase domain containing protein, expressed -
18 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
19 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
20 Sobic.003G434700 tRNA uridine 5-carboxymethylaminomethyl modification enzyme gidA, putative, expressed K03495: gidA, mnmG, tRNA uridine 5-carboxymethylaminomethyl modification enzyme


Gene co-expression network
sample Sobic004G354200 Sobic004G354200 Sobic004G034800 Sobic004G034800 Sobic004G354200--Sobic004G034800 Sobic008G011200 Sobic008G011200 Sobic004G354200--Sobic008G011200 Sobic010G176550 Sobic010G176550 Sobic004G354200--Sobic010G176550 Sobic002G127550 Sobic002G127550 Sobic004G354200--Sobic002G127550 Sobic006G030400 Sobic006G030400 Sobic004G354200--Sobic006G030400 Sobic001G433000 Sobic001G433000 Sobic004G354200--Sobic001G433000 Sobic004G120100 Sobic004G120100 Sobic004G354200--Sobic004G120100 Sobic003G381200 Sobic003G381200 Sobic004G354200--Sobic003G381200 Sobic007G185700 Sobic007G185700 Sobic004G354200--Sobic007G185700 Sobic006G216100 Sobic006G216100 Sobic004G034800--Sobic006G216100 Sobic004G034800--Sobic010G176550 Sobic003G138500 Sobic003G138500 Sobic004G034800--Sobic003G138500 Sobic004G034800--Sobic002G127550 Sobic003G052200 Sobic003G052200 Sobic004G034800--Sobic003G052200 Sobic001G035900 Sobic001G035900 Sobic004G034800--Sobic001G035900 Sobic007G116200 Sobic007G116200 Sobic004G034800--Sobic007G116200 Sobic008G162900 Sobic008G162900 Sobic004G034800--Sobic008G162900 Sobic010G243900 Sobic010G243900 Sobic004G034800--Sobic010G243900 Sobic007G204900 Sobic007G204900 Sobic008G011200--Sobic007G204900 Sobic005G155900 Sobic005G155900 Sobic008G011200--Sobic005G155900 Sobic008G011200--Sobic004G354200 Sobic002G114700 Sobic002G114700 Sobic008G011200--Sobic002G114700 Sobic003G254000 Sobic003G254000 Sobic008G011200--Sobic003G254000 Sobic004G035000 Sobic004G035000 Sobic008G011200--Sobic004G035000 Sobic004G001300 Sobic004G001300 Sobic008G011200--Sobic004G001300 Sobic001G261573 Sobic001G261573 Sobic008G011200--Sobic001G261573 Sobic006G186500 Sobic006G186500 Sobic008G011200--Sobic006G186500 Sobic002G031400 Sobic002G031400 Sobic010G176550--Sobic002G031400 Sobic010G176550--Sobic004G034800 Sobic010G176550--Sobic001G261573 Sobic003G217700 Sobic003G217700 Sobic010G176550--Sobic003G217700 Sobic010G176550--Sobic007G185700 Sobic010G176550--Sobic001G035900 Sobic003G234900 Sobic003G234900 Sobic010G176550--Sobic003G234900 Sobic010G005600 Sobic010G005600 Sobic010G176550--Sobic010G005600 Sobic010G032900 Sobic010G032900 Sobic010G176550--Sobic010G032900 Sobic002G127550--Sobic003G138500 Sobic010G126000 Sobic010G126000 Sobic002G127550--Sobic010G126000 Sobic008G044100 Sobic008G044100 Sobic002G127550--Sobic008G044100 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic002G127550--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic004G209600 Sobic004G209600 Sobic002G127550--Sobic004G209600 Sobic004G026500 Sobic004G026500 Sobic006G030400--Sobic004G026500 Sobic008G081900 Sobic008G081900 Sobic006G030400--Sobic008G081900 Sobic007G169300 Sobic007G169300 Sobic006G030400--Sobic007G169300 Sobic010G197000 Sobic010G197000 Sobic006G030400--Sobic010G197000 Sobic005G110532 Sobic005G110532 Sobic006G030400--Sobic005G110532 Sobic003G190000 Sobic003G190000 Sobic006G030400--Sobic003G190000 Sobic003G203300 Sobic003G203300 Sobic006G030400--Sobic003G203300 Sobic001G219700 Sobic001G219700 Sobic006G030400--Sobic001G219700 Sobic005G075100 Sobic005G075100 Sobic006G030400--Sobic005G075100 Sobic001G418700 Sobic001G418700 Sobic001G433000--Sobic001G418700 Sobic001G433000--Sobic004G034800 Sobic003G396200 Sobic003G396200 Sobic001G433000--Sobic003G396200 Sobic001G433000--Sobic007G116200 Sobic003G442700 Sobic003G442700 Sobic001G433000--Sobic003G442700 Sobic010G256700 Sobic010G256700 Sobic001G433000--Sobic010G256700 Sobic001G433000--Sobic002G127550 Sobic001G433000--Sobic004G354200 Sobic002G029900 Sobic002G029900 Sobic001G433000--Sobic002G029900 Sobic004G163800 Sobic004G163800 Sobic004G120100--Sobic004G163800 Sobic007G136200 Sobic007G136200 Sobic004G120100--Sobic007G136200 Sobic006G038500 Sobic006G038500 Sobic004G120100--Sobic006G038500 Sobic003G232700 Sobic003G232700 Sobic004G120100--Sobic003G232700 Sobic001G516901 Sobic001G516901 Sobic004G120100--Sobic001G516901 Sobic005G084500 Sobic005G084500 Sobic004G120100--Sobic005G084500 Sobic004G120100--Sobic003G234900 Sobic004G238200 Sobic004G238200 Sobic004G120100--Sobic004G238200 Sobic002G043600 Sobic002G043600 Sobic004G120100--Sobic002G043600 Sobic001G090500 Sobic001G090500 Sobic003G381200--Sobic001G090500 Sobic001G159400 Sobic001G159400 Sobic003G381200--Sobic001G159400 Sobic002G276100 Sobic002G276100 Sobic003G381200--Sobic002G276100 Sobic002G168300 Sobic002G168300 Sobic003G381200--Sobic002G168300 Sobic001G102500 Sobic001G102500 Sobic003G381200--Sobic001G102500 Sobic007G065100 Sobic007G065100 Sobic003G381200--Sobic007G065100 Sobic008G172300 Sobic008G172300 Sobic003G381200--Sobic008G172300 Sobic003G381200--Sobic003G138500 Sobic003G381200--Sobic004G026500 Sobic001G054100 Sobic001G054100 Sobic007G185700--Sobic001G054100 Sobic007G185700--Sobic003G234900 Sobic003G141100 Sobic003G141100 Sobic007G185700--Sobic003G141100 Sobic001G500600 Sobic001G500600 Sobic007G185700--Sobic001G500600 Sobic007G185700--Sobic003G217700 Sobic001G530900 Sobic001G530900 Sobic007G185700--Sobic001G530900 Sobic003G352500 Sobic003G352500 Sobic007G185700--Sobic003G352500 Sobic007G185700--Sobic001G261573 Sobic005G231100 Sobic005G231100 Sobic007G185700--Sobic005G231100
Octagon: transcription factors


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