Gene annotation
Transcriptome id Sobic.003G138500.5,Sobic.003G138500.3,Sobic.003G138500.6,Sobic.003G138500.2,Sobic.003G138500.4
Synonym Sb03g011810, ATAPA1, APA1
Functional annotation aspartic proteinase oryzasin-1 precursor, putative, expressed
UniProt A0A1B6Q332 , A0A1B6Q317
Pfam PF03489 PF05184 PF00026
Panther DB PTHR13683 PTHR13683:SF344
NCBI CDD KOG1339; Aspartyl protease KOG1340Prosaposin
KEGG Orthology K08245; phytepsin
Gene Ontology GO:0006629; lipid metabolic process GO:0006508proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G62290 : Saposin-like aspartyl protease family protein,aspartic proteinase A1
RAP-DB (Rice) LOC_Os05g04630.2,LOC_Os05g04630.4,LOC_Os05g04630.3,LOC_Os05g04630.6 : retrotransposon protein, putative, SINE subclass, expressed
MaizeGDB (Corn) Zm00025a056866 , Zm00025a038809 , Zm00025a035149 , Zm00025a049477
Brachypodium KQK04011 , KQK04010
Barley HORVU4Hr1G064410.1 , HORVU1Hr1G056420.2 , HORVU1Hr1G056420.3 , HORVU1Hr1G056420.1 , HORVU3Hr1G106370.10 , HORVU3Hr1G106370.11 , HORVU3Hr1G106370.12 , HORVU3Hr1G106370.13 , HORVU3Hr1G106370.14 , HORVU3Hr1G106370.15 , HORVU3Hr1G106370.16 , HORVU3Hr1G106370.17 , HORVU3Hr1G106370.18 , HORVU3Hr1G106370.19 , HORVU1Hr1G056440.1 , HORVU3Hr1G106370.25 , HORVU3Hr1G106370.24 , HORVU3Hr1G106370.27 , HORVU3Hr1G106370.26 , HORVU3Hr1G106370.21 , HORVU3Hr1G106370.20 , HORVU3Hr1G106370.23 , HORVU3Hr1G106370.22 , HORVU3Hr1G106370.29 , HORVU3Hr1G106370.28 , HORVU7Hr1G090140.1 , HORVU7Hr1G090140.3 , HORVU7Hr1G090140.2 , HORVU7Hr1G090140.4 , HORVU3Hr1G106370.38 , HORVU3Hr1G106370.39 , HORVU3Hr1G106370.32 , HORVU3Hr1G106370.33 , HORVU3Hr1G106370.30 , HORVU3Hr1G106370.31 , HORVU3Hr1G106370.36 , HORVU3Hr1G106370.37 , HORVU3Hr1G106370.34 , HORVU1Hr1G094270.1 , HORVU3Hr1G106370.2 , HORVU3Hr1G106370.3 , HORVU3Hr1G106370.1 , HORVU3Hr1G106370.7 , HORVU3Hr1G106370.4 , HORVU3Hr1G106370.5 , HORVU3Hr1G106370.8 , HORVU3Hr1G106370.9 , HORVU3Hr1G106370.42 , HORVU3Hr1G106370.41 , HORVU3Hr1G106370.40 , HORVU1Hr1G056440.2
Wheat TraesCS7B02G278500 , TraesCS7D02G373500 , TraesCS7D02G373500 , TraesCS7D02G373500 , TraesCS7A02G377200 , TraesCS7A02G377200
Populus -


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cDNA sequences
Sobic.003G138500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G127550 - -
2 Sobic.001G159400 protein kinase domain containing protein, expressed -
3 Sobic.004G034800 OsFBX440 - F-box domain containing protein, expressed -
4 Sobic.004G359800 inositol-1-monophosphatase, putative, expressed -
5 Sobic.010G176550 - -
6 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
7 Sobic.002G276100 OsLonP4 - Putative Lon protease homologue, expressed K01338: ATP-dependent Lon protease
8 Sobic.003G381200 KH domain containing protein, putative, expressed K14945: protein quaking
9 Sobic.001G186800 ATPAP18/PAP18, putative, expressed -
10 Sobic.003G247500 expressed protein -
11 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
12 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
13 Sobic.001G534066 - -
14 Sobic.008G094000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
15 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
16 Sobic.003G396200 expressed protein K13146: integrator complex subunit 9
17 Sobic.001G327800 uncharacterized mscS family protein, putative, expressed K16052: ynaI, MscS family membrane protein
18 Sobic.006G092000 expressed protein K18172: COX assembly mitochondrial protein 2
19 Sobic.006G133900 NIN, putative, expressed -
20 Sobic.001G194200 diacylglycerol kinase, putative, expressed -


Gene co-expression network
sample Sobic003G138500 Sobic003G138500 Sobic002G127550 Sobic002G127550 Sobic003G138500--Sobic002G127550 Sobic001G159400 Sobic001G159400 Sobic003G138500--Sobic001G159400 Sobic004G034800 Sobic004G034800 Sobic003G138500--Sobic004G034800 Sobic004G359800 Sobic004G359800 Sobic003G138500--Sobic004G359800 Sobic010G176550 Sobic010G176550 Sobic003G138500--Sobic010G176550 Sobic007G116200 Sobic007G116200 Sobic003G138500--Sobic007G116200 Sobic002G276100 Sobic002G276100 Sobic003G138500--Sobic002G276100 Sobic003G381200 Sobic003G381200 Sobic003G138500--Sobic003G381200 Sobic001G186800 Sobic001G186800 Sobic003G138500--Sobic001G186800 Sobic002G127550--Sobic003G138500 Sobic010G126000 Sobic010G126000 Sobic002G127550--Sobic010G126000 Sobic008G044100 Sobic008G044100 Sobic002G127550--Sobic008G044100 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic002G127550--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic004G209600 Sobic004G209600 Sobic002G127550--Sobic004G209600 Sobic001G159400--Sobic003G381200 Sobic001G159400--Sobic003G138500 Sobic001G090500 Sobic001G090500 Sobic001G159400--Sobic001G090500 Sobic010G256700 Sobic010G256700 Sobic001G159400--Sobic010G256700 Sobic007G193700 Sobic007G193700 Sobic001G159400--Sobic007G193700 Sobic001G159400--Sobic002G276100 Sobic003G396200 Sobic003G396200 Sobic001G159400--Sobic003G396200 Sobic004G181700 Sobic004G181700 Sobic001G159400--Sobic004G181700 Sobic004G317100 Sobic004G317100 Sobic001G159400--Sobic004G317100 Sobic006G216100 Sobic006G216100 Sobic004G034800--Sobic006G216100 Sobic004G034800--Sobic010G176550 Sobic004G034800--Sobic003G138500 Sobic004G034800--Sobic002G127550 Sobic003G052200 Sobic003G052200 Sobic004G034800--Sobic003G052200 Sobic001G035900 Sobic001G035900 Sobic004G034800--Sobic001G035900 Sobic004G034800--Sobic007G116200 Sobic008G162900 Sobic008G162900 Sobic004G034800--Sobic008G162900 Sobic010G243900 Sobic010G243900 Sobic004G034800--Sobic010G243900 Sobic004G359800--Sobic007G116200 Sobic002G169633 Sobic002G169633 Sobic004G359800--Sobic002G169633 Sobic004G359800--Sobic003G138500 Sobic002G134200 Sobic002G134200 Sobic004G359800--Sobic002G134200 Sobic003G280800 Sobic003G280800 Sobic004G359800--Sobic003G280800 Sobic010G139000 Sobic010G139000 Sobic004G359800--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic004G359800--Sobic006G182900 Sobic004G359800--Sobic010G176550 Sobic004G359800--Sobic002G127550 Sobic002G031400 Sobic002G031400 Sobic010G176550--Sobic002G031400 Sobic010G176550--Sobic004G034800 Sobic001G261573 Sobic001G261573 Sobic010G176550--Sobic001G261573 Sobic003G217700 Sobic003G217700 Sobic010G176550--Sobic003G217700 Sobic007G185700 Sobic007G185700 Sobic010G176550--Sobic007G185700 Sobic010G176550--Sobic001G035900 Sobic003G234900 Sobic003G234900 Sobic010G176550--Sobic003G234900 Sobic010G005600 Sobic010G005600 Sobic010G176550--Sobic010G005600 Sobic010G032900 Sobic010G032900 Sobic010G176550--Sobic010G032900 Sobic006G216800 Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic007G116200--Sobic010G010700 Sobic007G116200--Sobic002G134200 Sobic007G116200--Sobic006G182900 Sobic007G116200--Sobic004G359800 Sobic007G116200--Sobic010G139000 Sobic007G116200--Sobic010G256700 Sobic007G116200--Sobic004G209600 Sobic007G116200--Sobic003G280800 Sobic002G276100--Sobic003G381200 Sobic004G026500 Sobic004G026500 Sobic002G276100--Sobic004G026500 Sobic002G276100--Sobic004G181700 Sobic002G276100--Sobic001G159400 Sobic010G138000 Sobic010G138000 Sobic002G276100--Sobic010G138000 Sobic002G168500 Sobic002G168500 Sobic002G276100--Sobic002G168500 Sobic009G193500 Sobic009G193500 Sobic002G276100--Sobic009G193500 Sobic008G172300 Sobic008G172300 Sobic002G276100--Sobic008G172300 Sobic001G268200 Sobic001G268200 Sobic002G276100--Sobic001G268200 Sobic003G381200--Sobic001G090500 Sobic003G381200--Sobic001G159400 Sobic003G381200--Sobic002G276100 Sobic002G168300 Sobic002G168300 Sobic003G381200--Sobic002G168300 Sobic001G102500 Sobic001G102500 Sobic003G381200--Sobic001G102500 Sobic007G065100 Sobic007G065100 Sobic003G381200--Sobic007G065100 Sobic003G381200--Sobic008G172300 Sobic003G381200--Sobic003G138500 Sobic003G381200--Sobic004G026500 Sobic002G294800 Sobic002G294800 Sobic001G186800--Sobic002G294800 Sobic004G021200 Sobic004G021200 Sobic001G186800--Sobic004G021200 Sobic003G141500 Sobic003G141500 Sobic001G186800--Sobic003G141500 Sobic006G200600 Sobic006G200600 Sobic001G186800--Sobic006G200600 Sobic001G281600 Sobic001G281600 Sobic001G186800--Sobic001G281600 Sobic001G186800--Sobic003G138500 Sobic010G262000 Sobic010G262000 Sobic001G186800--Sobic010G262000 Sobic009G199200 Sobic009G199200 Sobic001G186800--Sobic009G199200 Sobic005G027400 Sobic005G027400 Sobic001G186800--Sobic005G027400
Octagon: transcription factors


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