Gene annotation
Transcriptome id Sobic.004G034800.6,Sobic.004G034800.4,Sobic.004G034800.2,Sobic.004G034800.3,Sobic.004G034800.5,Sobic.004G034800.7
Synonym
Functional annotation OsFBX440 - F-box domain containing protein, expressed
UniProt A0A1Z5RLK3 , A0A194YMH2
Pfam -
Panther DB PTHR31790 PTHR31790:SF15 PTHR31790:SF15 PTHR31790
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02030 : F-box family protein
RAP-DB (Rice) LOC_Os12g06740.1 : OsFBX440 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G216100 expressed protein -
2 Sobic.010G176550 - -
3 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
4 Sobic.002G127550 - -
5 Sobic.003G052200 G-patch domain containing protein, expressed -
6 Sobic.001G035900 expressed protein K13156: U11/U12 small nuclear ribonucleoprotein 48 kDa protein
7 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
8 Sobic.008G162900 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
9 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
10 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
11 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
12 Sobic.010G247800 zinc finger, C3HC4 type domain containing protein, expressed K10696: E3 ubiquitin-protein ligase BRE1
13 Sobic.001G159400 protein kinase domain containing protein, expressed -
14 Sobic.003G067100 aspartyl-tRNA synthetase, putative, expressed K01876: aspartyl-tRNA synthetase
15 Sobic.001G002000 protein kinase domain containing protein, expressed -
16 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
17 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
18 Sobic.001G046200 - -
19 Sobic.006G182900 expressed protein -
20 Sobic.004G120100 phosphoglucan, water dikinase, chloroplast precursor, putative, expressed K15535: phosphoglucan, water dikinase


Gene co-expression network
sample Sobic004G034800 Sobic004G034800 Sobic006G216100 Sobic006G216100 Sobic004G034800--Sobic006G216100 Sobic010G176550 Sobic010G176550 Sobic004G034800--Sobic010G176550 Sobic003G138500 Sobic003G138500 Sobic004G034800--Sobic003G138500 Sobic002G127550 Sobic002G127550 Sobic004G034800--Sobic002G127550 Sobic003G052200 Sobic003G052200 Sobic004G034800--Sobic003G052200 Sobic001G035900 Sobic001G035900 Sobic004G034800--Sobic001G035900 Sobic007G116200 Sobic007G116200 Sobic004G034800--Sobic007G116200 Sobic008G162900 Sobic008G162900 Sobic004G034800--Sobic008G162900 Sobic010G243900 Sobic010G243900 Sobic004G034800--Sobic010G243900 Sobic006G216100--Sobic004G034800 Sobic002G042800 Sobic002G042800 Sobic006G216100--Sobic002G042800 Sobic003G168100 Sobic003G168100 Sobic006G216100--Sobic003G168100 Sobic001G455600 Sobic001G455600 Sobic006G216100--Sobic001G455600 Sobic006G252900 Sobic006G252900 Sobic006G216100--Sobic006G252900 Sobic009G132700 Sobic009G132700 Sobic006G216100--Sobic009G132700 Sobic007G031900 Sobic007G031900 Sobic006G216100--Sobic007G031900 Sobic003G398700 Sobic003G398700 Sobic006G216100--Sobic003G398700 Sobic004G244900 Sobic004G244900 Sobic006G216100--Sobic004G244900 Sobic002G031400 Sobic002G031400 Sobic010G176550--Sobic002G031400 Sobic010G176550--Sobic004G034800 Sobic001G261573 Sobic001G261573 Sobic010G176550--Sobic001G261573 Sobic003G217700 Sobic003G217700 Sobic010G176550--Sobic003G217700 Sobic007G185700 Sobic007G185700 Sobic010G176550--Sobic007G185700 Sobic010G176550--Sobic001G035900 Sobic003G234900 Sobic003G234900 Sobic010G176550--Sobic003G234900 Sobic010G005600 Sobic010G005600 Sobic010G176550--Sobic010G005600 Sobic010G032900 Sobic010G032900 Sobic010G176550--Sobic010G032900 Sobic003G138500--Sobic002G127550 Sobic001G159400 Sobic001G159400 Sobic003G138500--Sobic001G159400 Sobic003G138500--Sobic004G034800 Sobic004G359800 Sobic004G359800 Sobic003G138500--Sobic004G359800 Sobic003G138500--Sobic010G176550 Sobic003G138500--Sobic007G116200 Sobic002G276100 Sobic002G276100 Sobic003G138500--Sobic002G276100 Sobic003G381200 Sobic003G381200 Sobic003G138500--Sobic003G381200 Sobic001G186800 Sobic001G186800 Sobic003G138500--Sobic001G186800 Sobic002G127550--Sobic003G138500 Sobic010G126000 Sobic010G126000 Sobic002G127550--Sobic010G126000 Sobic008G044100 Sobic008G044100 Sobic002G127550--Sobic008G044100 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic002G127550--Sobic008G001200 Sobic010G010700 Sobic010G010700 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic004G209600 Sobic004G209600 Sobic002G127550--Sobic004G209600 Sobic009G126400 Sobic009G126400 Sobic003G052200--Sobic009G126400 Sobic004G208900 Sobic004G208900 Sobic003G052200--Sobic004G208900 Sobic001G222500 Sobic001G222500 Sobic003G052200--Sobic001G222500 Sobic009G040600 Sobic009G040600 Sobic003G052200--Sobic009G040600 Sobic003G052200--Sobic008G162900 Sobic008G028700 Sobic008G028700 Sobic003G052200--Sobic008G028700 Sobic004G009600 Sobic004G009600 Sobic003G052200--Sobic004G009600 Sobic010G279450 Sobic010G279450 Sobic003G052200--Sobic010G279450 Sobic009G024000 Sobic009G024000 Sobic003G052200--Sobic009G024000 Sobic003G254000 Sobic003G254000 Sobic001G035900--Sobic003G254000 Sobic001G035900--Sobic002G031400 Sobic002G064750 Sobic002G064750 Sobic001G035900--Sobic002G064750 Sobic007G099100 Sobic007G099100 Sobic001G035900--Sobic007G099100 Sobic001G274200 Sobic001G274200 Sobic001G035900--Sobic001G274200 Sobic003G429650 Sobic003G429650 Sobic001G035900--Sobic003G429650 Sobic001G035900--Sobic010G176550 Sobic007G161000 Sobic007G161000 Sobic001G035900--Sobic007G161000 Sobic001G035900--Sobic009G024000 Sobic006G216800 Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic007G116200--Sobic010G010700 Sobic002G134200 Sobic002G134200 Sobic007G116200--Sobic002G134200 Sobic006G182900 Sobic006G182900 Sobic007G116200--Sobic006G182900 Sobic007G116200--Sobic004G359800 Sobic010G139000 Sobic010G139000 Sobic007G116200--Sobic010G139000 Sobic010G256700 Sobic010G256700 Sobic007G116200--Sobic010G256700 Sobic007G116200--Sobic004G209600 Sobic003G280800 Sobic003G280800 Sobic007G116200--Sobic003G280800 Sobic003G184699 Sobic003G184699 Sobic008G162900--Sobic003G184699 Sobic008G162900--Sobic009G126400 Sobic008G047800 Sobic008G047800 Sobic008G162900--Sobic008G047800 Sobic001G407200 Sobic001G407200 Sobic008G162900--Sobic001G407200 Sobic005G013200 Sobic005G013200 Sobic008G162900--Sobic005G013200 Sobic008G162900--Sobic003G052200 Sobic008G162900--Sobic006G216800 Sobic008G162900--Sobic001G222500 Sobic002G343901 Sobic002G343901 Sobic008G162900--Sobic002G343901 Sobic001G046200 Sobic001G046200 Sobic010G243900--Sobic001G046200 Sobic004G042200 Sobic004G042200 Sobic010G243900--Sobic004G042200 Sobic010G149200 Sobic010G149200 Sobic010G243900--Sobic010G149200 Sobic001G161800 Sobic001G161800 Sobic010G243900--Sobic001G161800 Sobic010G243900--Sobic003G398700 Sobic008G113100 Sobic008G113100 Sobic010G243900--Sobic008G113100 Sobic010G021500 Sobic010G021500 Sobic010G243900--Sobic010G021500 Sobic002G029900 Sobic002G029900 Sobic010G243900--Sobic002G029900 Sobic010G243900--Sobic002G042800
Octagon: transcription factors


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