Gene annotation
Transcriptome id Sobic.004G200400.1
Synonym Sb04g024680
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XWH5
Pfam PF07714
Panther DB PTHR23257 PTHR23257:SF521
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G50180 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g38080.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a031820
Brachypodium KQK00146 , KQK00147
Barley HORVU6Hr1G053310.1 , HORVU6Hr1G053310.2 , HORVU6Hr1G053310.3 , HORVU6Hr1G053310.4
Wheat TraesCS6B02G237600 , TraesCS6B02G237600 , TraesCS6A02G208500 , TraesCS6D02G192100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G207500 OsFBX238 - F-box domain containing protein, expressed -
2 Sobic.007G204600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha amylase, catalytic domain containing protein, expressed K01214: ISA, isoamylase
3 Sobic.005G052100 expressed protein -
4 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.005G003100 expressed protein -
6 Sobic.002G069800 OsFBX221 - F-box domain containing protein, expressed -
7 Sobic.001G330600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
8 Sobic.009G013200 - -
9 Sobic.003G213100 AAA-type ATPase family protein, putative, expressed -
10 Sobic.009G051201 - -
11 Sobic.007G122932 - -
12 Sobic.006G271400 methyl-CpG binding domain containing protein, expressed -
13 Sobic.007G069800 expressed protein -
14 Sobic.002G147500 early fruit mRNA, putative, expressed -
15 Sobic.010G009250 - -
16 Sobic.003G225800 AAA-type ATPase family protein, putative, expressed -
17 Sobic.002G101200 zinc finger, C3HC4 type domain containing protein, expressed K10638: UHRF1, E3 ubiquitin-protein ligase UHRF1
18 Sobic.002G021600 OsFBX234 - F-box domain containing protein, expressed -
19 Sobic.003G291100 - -
20 Sobic.003G230500 "Sh2(Ortholog in maize:Jiang et al., 2013a)"(PubMedID : 31659869)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase


Gene co-expression network
sample Sobic004G200400 Sobic004G200400 Sobic009G207500 Sobic009G207500 Sobic004G200400--Sobic009G207500 Sobic007G204600 Sobic007G204600 Sobic004G200400--Sobic007G204600 Sobic005G052100 Sobic005G052100 Sobic004G200400--Sobic005G052100 Sobic005G075000 Sobic005G075000 Sobic004G200400--Sobic005G075000 Sobic005G003100 Sobic005G003100 Sobic004G200400--Sobic005G003100 Sobic002G069800 Sobic002G069800 Sobic004G200400--Sobic002G069800 Sobic001G330600 Sobic001G330600 Sobic004G200400--Sobic001G330600 Sobic009G013200 Sobic009G013200 Sobic004G200400--Sobic009G013200 Sobic003G213100 Sobic003G213100 Sobic004G200400--Sobic003G213100 Sobic005G090500 Sobic005G090500 Sobic009G207500--Sobic005G090500 Sobic006G271400 Sobic006G271400 Sobic009G207500--Sobic006G271400 Sobic002G053100 Sobic002G053100 Sobic009G207500--Sobic002G053100 Sobic010G209300 Sobic010G209300 Sobic009G207500--Sobic010G209300 Sobic006G031000 Sobic006G031000 Sobic009G207500--Sobic006G031000 Sobic009G021300 Sobic009G021300 Sobic009G207500--Sobic009G021300 Sobic009G207500--Sobic005G075000 Sobic001G142600 Sobic001G142600 Sobic009G207500--Sobic001G142600 Sobic002G408700 Sobic002G408700 Sobic009G207500--Sobic002G408700 Sobic007G204600--Sobic003G213100 Sobic007G204600--Sobic002G069800 Sobic003G225800 Sobic003G225800 Sobic007G204600--Sobic003G225800 Sobic005G197000 Sobic005G197000 Sobic007G204600--Sobic005G197000 Sobic002G217000 Sobic002G217000 Sobic007G204600--Sobic002G217000 Sobic009G051201 Sobic009G051201 Sobic007G204600--Sobic009G051201 Sobic007G204600--Sobic005G003100 Sobic002G101200 Sobic002G101200 Sobic007G204600--Sobic002G101200 Sobic005G035500 Sobic005G035500 Sobic007G204600--Sobic005G035500 Sobic007G069800 Sobic007G069800 Sobic005G052100--Sobic007G069800 Sobic001G112350 Sobic001G112350 Sobic005G052100--Sobic001G112350 Sobic005G052100--Sobic002G069800 Sobic005G052100--Sobic005G003100 Sobic007G127700 Sobic007G127700 Sobic005G052100--Sobic007G127700 Sobic005G052100--Sobic009G013200 Sobic008G143400 Sobic008G143400 Sobic005G052100--Sobic008G143400 Sobic005G052100--Sobic003G213100 Sobic005G052100--Sobic001G330600 Sobic005G075000--Sobic006G271400 Sobic005G075000--Sobic010G209300 Sobic005G075000--Sobic006G031000 Sobic005G075000--Sobic005G003100 Sobic005G075000--Sobic009G013200 Sobic007G122932 Sobic007G122932 Sobic005G075000--Sobic007G122932 Sobic005G075000--Sobic001G330600 Sobic005G075000--Sobic009G051201 Sobic003G291100 Sobic003G291100 Sobic005G075000--Sobic003G291100 Sobic005G003100--Sobic003G213100 Sobic005G003100--Sobic002G069800 Sobic005G003100--Sobic009G051201 Sobic005G003100--Sobic005G075000 Sobic005G003100--Sobic003G225800 Sobic005G003100--Sobic009G013200 Sobic005G003100--Sobic002G101200 Sobic005G003100--Sobic002G217000 Sobic005G003100--Sobic005G052100 Sobic002G069800--Sobic003G213100 Sobic002G069800--Sobic005G003100 Sobic002G069800--Sobic009G051201 Sobic002G069800--Sobic005G052100 Sobic002G069800--Sobic007G069800 Sobic002G069800--Sobic005G035500 Sobic002G069800--Sobic003G225800 Sobic002G069800--Sobic005G197000 Sobic002G069800--Sobic002G217000 Sobic002G147500 Sobic002G147500 Sobic001G330600--Sobic002G147500 Sobic001G330600--Sobic009G013200 Sobic001G330600--Sobic007G122932 Sobic007G147300 Sobic007G147300 Sobic001G330600--Sobic007G147300 Sobic007G123000 Sobic007G123000 Sobic001G330600--Sobic007G123000 Sobic001G330600--Sobic005G075000 Sobic006G279000 Sobic006G279000 Sobic001G330600--Sobic006G279000 Sobic001G330600--Sobic010G209300 Sobic001G330600--Sobic009G021300 Sobic009G013200--Sobic001G330600 Sobic009G013200--Sobic007G122932 Sobic009G013200--Sobic002G147500 Sobic009G013200--Sobic003G213100 Sobic009G013200--Sobic005G075000 Sobic009G013200--Sobic005G003100 Sobic009G013200--Sobic007G123000 Sobic009G013200--Sobic009G051201 Sobic009G013200--Sobic003G225800 Sobic003G213100--Sobic003G225800 Sobic003G213100--Sobic005G197000 Sobic003G213100--Sobic002G217000 Sobic003G213100--Sobic009G051201 Sobic003G213100--Sobic002G069800 Sobic005G089101 Sobic005G089101 Sobic003G213100--Sobic005G089101 Sobic003G213100--Sobic005G003100 Sobic003G213100--Sobic009G013200 Sobic003G213100--Sobic002G101200
Octagon: transcription factors


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