Gene annotation
Transcriptome id Sobic.010G009250.1
Synonym -
Functional annotation -
UniProt A0A1W0VR34
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF134
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02930.1 : OsFBX210 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK20390
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G200400 protein kinase domain containing protein, expressed -
2 Sobic.009G122375 - -
3 Sobic.004G187200 ICE-like protease p20 domain containing protein, putative, expressed -
4 Sobic.003G412200 inducer of CBF expression 2, putative, expressed -
5 Sobic.005G052100 expressed protein -
6 Sobic.002G104300 FAS1, putative, expressed K10750: chromatin assembly factor 1 subunit A
7 Sobic.001G330600 NAD dependent epimerase/dehydratase family protein, putative, expressed -
8 Sobic.004G090200 OsFBX46 - F-box domain containing protein, expressed -
9 Sobic.001G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan phosphorylast isozyme, putative, expressed K00688: PYG, glycogen phosphorylase
10 Sobic.002G147500 early fruit mRNA, putative, expressed -
11 Sobic.007G018700 kinesin motor domain containing protein, putative, expressed -
12 Sobic.001G112350 - -
13 Sobic.007G204600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Alpha amylase, catalytic domain containing protein, expressed K01214: ISA, isoamylase
14 Sobic.009G013200 - -
15 Sobic.007G069800 expressed protein -
16 Sobic.003G089200 expressed protein -
17 Sobic.005G050600 protein of unknown function domain containing protein, expressed -
18 Sobic.003G230500 "Sh2(Ortholog in maize:Jiang et al., 2013a)"(PubMedID : 31659869)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
19 Sobic.001G347400 expressed protein -
20 Sobic.005G075000 LTPL33 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic010G009250 Sobic010G009250 Sobic004G200400 Sobic004G200400 Sobic010G009250--Sobic004G200400 Sobic009G122375 Sobic009G122375 Sobic010G009250--Sobic009G122375 Sobic004G187200 Sobic004G187200 Sobic010G009250--Sobic004G187200 Sobic003G412200 Sobic003G412200 Sobic010G009250--Sobic003G412200 Sobic005G052100 Sobic005G052100 Sobic010G009250--Sobic005G052100 Sobic002G104300 Sobic002G104300 Sobic010G009250--Sobic002G104300 Sobic001G330600 Sobic001G330600 Sobic010G009250--Sobic001G330600 Sobic004G090200 Sobic004G090200 Sobic010G009250--Sobic004G090200 Sobic001G083900 Sobic001G083900 Sobic010G009250--Sobic001G083900 Sobic009G207500 Sobic009G207500 Sobic004G200400--Sobic009G207500 Sobic007G204600 Sobic007G204600 Sobic004G200400--Sobic007G204600 Sobic004G200400--Sobic005G052100 Sobic005G075000 Sobic005G075000 Sobic004G200400--Sobic005G075000 Sobic005G003100 Sobic005G003100 Sobic004G200400--Sobic005G003100 Sobic002G069800 Sobic002G069800 Sobic004G200400--Sobic002G069800 Sobic004G200400--Sobic001G330600 Sobic009G013200 Sobic009G013200 Sobic004G200400--Sobic009G013200 Sobic003G213100 Sobic003G213100 Sobic004G200400--Sobic003G213100 Sobic009G122375--Sobic004G187200 Sobic009G122375--Sobic007G204600 Sobic009G122375--Sobic004G200400 Sobic009G122375--Sobic001G330600 Sobic002G147500 Sobic002G147500 Sobic009G122375--Sobic002G147500 Sobic009G122375--Sobic004G090200 Sobic009G122375--Sobic009G013200 Sobic009G122375--Sobic005G052100 Sobic009G122375--Sobic010G009250 Sobic001G234000 Sobic001G234000 Sobic004G187200--Sobic001G234000 Sobic004G090300 Sobic004G090300 Sobic004G187200--Sobic004G090300 Sobic009G029900 Sobic009G029900 Sobic004G187200--Sobic009G029900 Sobic004G187200--Sobic004G090200 Sobic004G187200--Sobic002G147500 Sobic006G279000 Sobic006G279000 Sobic004G187200--Sobic006G279000 Sobic007G064400 Sobic007G064400 Sobic004G187200--Sobic007G064400 Sobic004G187200--Sobic001G330600 Sobic001G530400 Sobic001G530400 Sobic004G187200--Sobic001G530400 Sobic003G230500 Sobic003G230500 Sobic003G412200--Sobic003G230500 Sobic007G147300 Sobic007G147300 Sobic003G412200--Sobic007G147300 Sobic007G122932 Sobic007G122932 Sobic003G412200--Sobic007G122932 Sobic009G021300 Sobic009G021300 Sobic003G412200--Sobic009G021300 Sobic008G001700 Sobic008G001700 Sobic003G412200--Sobic008G001700 Sobic008G071900 Sobic008G071900 Sobic003G412200--Sobic008G071900 Sobic007G123000 Sobic007G123000 Sobic003G412200--Sobic007G123000 Sobic005G001500 Sobic005G001500 Sobic003G412200--Sobic005G001500 Sobic009G086800 Sobic009G086800 Sobic003G412200--Sobic009G086800 Sobic007G069800 Sobic007G069800 Sobic005G052100--Sobic007G069800 Sobic001G112350 Sobic001G112350 Sobic005G052100--Sobic001G112350 Sobic005G052100--Sobic002G069800 Sobic005G052100--Sobic005G003100 Sobic007G127700 Sobic007G127700 Sobic005G052100--Sobic007G127700 Sobic005G052100--Sobic009G013200 Sobic008G143400 Sobic008G143400 Sobic005G052100--Sobic008G143400 Sobic005G052100--Sobic003G213100 Sobic005G052100--Sobic001G330600 Sobic002G104300--Sobic001G083900 Sobic001G425900 Sobic001G425900 Sobic002G104300--Sobic001G425900 Sobic004G163700 Sobic004G163700 Sobic002G104300--Sobic004G163700 Sobic004G339900 Sobic004G339900 Sobic002G104300--Sobic004G339900 Sobic010G273800 Sobic010G273800 Sobic002G104300--Sobic010G273800 Sobic001G278700 Sobic001G278700 Sobic002G104300--Sobic001G278700 Sobic004G065850 Sobic004G065850 Sobic002G104300--Sobic004G065850 Sobic002G420400 Sobic002G420400 Sobic002G104300--Sobic002G420400 Sobic002G104300--Sobic004G200400 Sobic001G330600--Sobic002G147500 Sobic001G330600--Sobic009G013200 Sobic001G330600--Sobic007G122932 Sobic001G330600--Sobic007G147300 Sobic001G330600--Sobic007G123000 Sobic001G330600--Sobic005G075000 Sobic001G330600--Sobic006G279000 Sobic010G209300 Sobic010G209300 Sobic001G330600--Sobic010G209300 Sobic001G330600--Sobic009G021300 Sobic004G090200--Sobic001G330600 Sobic004G090200--Sobic002G147500 Sobic004G090200--Sobic005G052100 Sobic004G090200--Sobic004G187200 Sobic004G090200--Sobic006G279000 Sobic004G090200--Sobic009G013200 Sobic004G090200--Sobic001G112350 Sobic004G090200--Sobic007G069800 Sobic004G090200--Sobic004G090300 Sobic001G083900--Sobic002G104300 Sobic001G083900--Sobic001G425900 Sobic001G083900--Sobic010G273800 Sobic001G083900--Sobic004G163700 Sobic001G083900--Sobic009G013200 Sobic001G083900--Sobic003G213100 Sobic001G083900--Sobic003G412200 Sobic001G083900--Sobic007G204600 Sobic001G083900--Sobic005G003100
Octagon: transcription factors


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