Gene annotation
Transcriptome id Sobic.004G135400.1
Synonym Sb04g014390
Functional annotation expressed protein
UniProt C5Y0N5
Pfam PF14661
Panther DB PTHR16151
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0051297; centrosome cycle


Orthologs (automatic annotation)
TAIR AT5G40740 : -
RAP-DB (Rice) LOC_Os02g22370.1 : expressed protein
MaizeGDB (Corn) Zm00025a019422
Brachypodium KQJ91732
Barley HORVU5Hr1G034570.12 , HORVU5Hr1G034570.13 , HORVU5Hr1G034570.10 , HORVU5Hr1G034570.11 , HORVU5Hr1G034570.14 , HORVU5Hr1G034570.15 , HORVU2Hr1G093160.1 , HORVU2Hr1G093150.2 , HORVU2Hr1G093150.1 , HORVU5Hr1G034570.8 , HORVU5Hr1G034570.9 , HORVU5Hr1G034570.1 , HORVU5Hr1G034570.2 , HORVU5Hr1G034570.3 , HORVU5Hr1G034570.4 , HORVU5Hr1G034570.5 , HORVU5Hr1G034570.6 , HORVU5Hr1G034570.7
Wheat TraesCS5B02G109200 , TraesCS5B02G109200 , TraesCS5B02G109200 , TraesCS5D02G123400 , TraesCS5D02G123400 , TraesCS5D02G123400 , TraesCS5D02G123400 , TraesCS5D02G123400 , TraesCS5A02G110600 , TraesCS5A02G110600 , TraesCS5A02G110600 , TraesCS5A02G110600
Populus -


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cDNA sequences
Sobic.004G135400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha
2 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
3 Sobic.008G099800 expressed protein -
4 Sobic.004G277200 GPI transamidase subunit PIG-U domain containing protein, expressed K05293: GPI-anchor transamidase subunit U
5 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
6 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
7 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
9 Sobic.009G245800 protein of unknown function DUF1296 domain containing protein, expressed -
10 Sobic.009G084900 expressed protein -
11 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
12 Sobic.002G142900 immunoglobulin/major histocompatibility complex, putative, expressed K12607: CCR4-NOT transcription complex subunit 10
13 Sobic.010G116600 FHA domain containing protein, putative, expressed -
14 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
15 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
16 Sobic.002G397500 SAC3/GANP family protein, expressed -
17 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
18 Sobic.001G281100 START domain containing protein, expressed -
19 Sobic.004G131300 expressed protein K12617: PATL1, DNA topoisomerase 2-associated protein PAT1
20 Sobic.003G229500 ZOS12-01 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic004G135400 Sobic004G135400 Sobic001G534800 Sobic001G534800 Sobic004G135400--Sobic001G534800 Sobic006G208500 Sobic006G208500 Sobic004G135400--Sobic006G208500 Sobic008G099800 Sobic008G099800 Sobic004G135400--Sobic008G099800 Sobic004G277200 Sobic004G277200 Sobic004G135400--Sobic004G277200 Sobic005G003300 Sobic005G003300 Sobic004G135400--Sobic005G003300 Sobic008G004600 Sobic008G004600 Sobic004G135400--Sobic008G004600 Sobic006G126100 Sobic006G126100 Sobic004G135400--Sobic006G126100 Sobic002G042600 Sobic002G042600 Sobic004G135400--Sobic002G042600 Sobic009G245800 Sobic009G245800 Sobic004G135400--Sobic009G245800 Sobic001G281100 Sobic001G281100 Sobic001G534800--Sobic001G281100 Sobic001G534800--Sobic008G099800 Sobic004G004300 Sobic004G004300 Sobic001G534800--Sobic004G004300 Sobic001G534800--Sobic004G135400 Sobic001G534800--Sobic005G003300 Sobic005G026200 Sobic005G026200 Sobic001G534800--Sobic005G026200 Sobic006G012500 Sobic006G012500 Sobic001G534800--Sobic006G012500 Sobic004G113400 Sobic004G113400 Sobic001G534800--Sobic004G113400 Sobic001G065000 Sobic001G065000 Sobic001G534800--Sobic001G065000 Sobic006G208500--Sobic004G135400 Sobic003G006400 Sobic003G006400 Sobic006G208500--Sobic003G006400 Sobic006G136400 Sobic006G136400 Sobic006G208500--Sobic006G136400 Sobic006G208500--Sobic009G245800 Sobic006G208500--Sobic006G126100 Sobic004G039600 Sobic004G039600 Sobic006G208500--Sobic004G039600 Sobic006G200700 Sobic006G200700 Sobic006G208500--Sobic006G200700 Sobic001G369000 Sobic001G369000 Sobic006G208500--Sobic001G369000 Sobic006G208500--Sobic004G277200 Sobic008G099800--Sobic006G012500 Sobic008G099800--Sobic001G534800 Sobic008G099800--Sobic004G135400 Sobic001G347500 Sobic001G347500 Sobic008G099800--Sobic001G347500 Sobic008G099800--Sobic001G281100 Sobic008G099800--Sobic004G113400 Sobic008G099800--Sobic004G039600 Sobic003G072200 Sobic003G072200 Sobic008G099800--Sobic003G072200 Sobic008G099800--Sobic001G065000 Sobic004G277200--Sobic004G135400 Sobic004G277200--Sobic008G099800 Sobic010G118950 Sobic010G118950 Sobic004G277200--Sobic010G118950 Sobic007G225100 Sobic007G225100 Sobic004G277200--Sobic007G225100 Sobic003G104000 Sobic003G104000 Sobic004G277200--Sobic003G104000 Sobic004G277200--Sobic006G208500 Sobic003G332500 Sobic003G332500 Sobic004G277200--Sobic003G332500 Sobic004G277200--Sobic006G200700 Sobic009G201700 Sobic009G201700 Sobic004G277200--Sobic009G201700 Sobic005G003300--Sobic001G534800 Sobic005G003300--Sobic005G026200 Sobic005G003300--Sobic004G135400 Sobic005G003300--Sobic004G004300 Sobic005G003300--Sobic008G004600 Sobic005G003300--Sobic006G126100 Sobic008G003700 Sobic008G003700 Sobic005G003300--Sobic008G003700 Sobic005G003300--Sobic008G099800 Sobic005G003300--Sobic004G039600 Sobic008G004600--Sobic006G126100 Sobic008G004600--Sobic006G136400 Sobic008G004600--Sobic004G135400 Sobic008G004600--Sobic005G003300 Sobic010G205800 Sobic010G205800 Sobic008G004600--Sobic010G205800 Sobic008G004600--Sobic006G208500 Sobic008G004600--Sobic004G039600 Sobic001G007000 Sobic001G007000 Sobic008G004600--Sobic001G007000 Sobic002G359400 Sobic002G359400 Sobic008G004600--Sobic002G359400 Sobic006G126100--Sobic004G004300 Sobic006G126100--Sobic008G004600 Sobic006G126100--Sobic004G039600 Sobic006G126100--Sobic001G534800 Sobic006G126100--Sobic003G104000 Sobic006G126100--Sobic006G012500 Sobic006G126100--Sobic004G135400 Sobic007G132100 Sobic007G132100 Sobic006G126100--Sobic007G132100 Sobic006G126100--Sobic006G208500 Sobic001G065100 Sobic001G065100 Sobic002G042600--Sobic001G065100 Sobic006G184900 Sobic006G184900 Sobic002G042600--Sobic006G184900 Sobic008G098900 Sobic008G098900 Sobic002G042600--Sobic008G098900 Sobic002G401500 Sobic002G401500 Sobic002G042600--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic002G042600--Sobic002G179400 Sobic004G322400 Sobic004G322400 Sobic002G042600--Sobic004G322400 Sobic002G429300 Sobic002G429300 Sobic002G042600--Sobic002G429300 Sobic008G088872 Sobic008G088872 Sobic002G042600--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic002G042600--Sobic001G370900 Sobic010G053800 Sobic010G053800 Sobic009G245800--Sobic010G053800 Sobic003G404500 Sobic003G404500 Sobic009G245800--Sobic003G404500 Sobic004G072100 Sobic004G072100 Sobic009G245800--Sobic004G072100 Sobic008G047800 Sobic008G047800 Sobic009G245800--Sobic008G047800 Sobic009G245800--Sobic006G208500 Sobic006G195700 Sobic006G195700 Sobic009G245800--Sobic006G195700 Sobic002G310200 Sobic002G310200 Sobic009G245800--Sobic002G310200 Sobic009G245800--Sobic004G135400 Sobic003G443100 Sobic003G443100 Sobic009G245800--Sobic003G443100
Octagon: transcription factors


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