Gene annotation
Transcriptome id Sobic.003G229500.7,Sobic.003G229500.2,Sobic.003G229500.6,Sobic.003G229500.5,Sobic.003G229500.3,Sobic.003G229500.4
Synonym
Functional annotation ZOS12-01 - C2H2 zinc finger protein, expressed
UniProt A0A1B6Q4T6
Pfam -
Panther DB PTHR37393
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g05920.1 : ZOS12-01 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a028325 , Zm00025a038625
Brachypodium PNT65425 , PNT65426 , KQJ92204 , KQJ92203 , KQJ92202 , KQJ92201 , KQJ92200 , KQJ92199 , KQJ92198
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G132600 expressed protein -
2 Sobic.007G062800 SET domain containing protein, expressed -
3 Sobic.003G101400 transcriptional repressor, putative, expressed K11644: paired amphipathic helix protein Sin3a
4 Sobic.001G196500 plus-3 domain containing protein, putative, expressed -
5 Sobic.002G042600 ubiquitin carboxyl-terminal hydrolase, putative, expressed K11838: USP7, ubiquitin carboxyl-terminal hydrolase 7
6 Sobic.001G363500 DIRP family protein, putative, expressed -
7 Sobic.001G347500 expressed protein -
8 Sobic.003G072200 zinc finger protein, putative, expressed K11978: E3 ubiquitin-protein ligase UBR3
9 Sobic.001G540400 expressed protein -
10 Sobic.001G016600 FAR1 family protein, expressed -
11 Sobic.001G281100 START domain containing protein, expressed -
12 Sobic.010G148932 - -
13 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
14 Sobic.009G027300 MYB family transcription factor, putative, expressed K04650: NCOR1, nuclear receptor co-repressor 1
15 Sobic.002G397500 SAC3/GANP family protein, expressed -
16 Sobic.001G065000 expressed protein -
17 Sobic.003G422500 expressed protein -
18 Sobic.001G037100 expressed protein K19026: spatacsin
19 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
20 Sobic.001G289800 BAH domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G229500 Sobic003G229500 Sobic008G132600 Sobic008G132600 Sobic003G229500--Sobic008G132600 Sobic007G062800 Sobic007G062800 Sobic003G229500--Sobic007G062800 Sobic003G101400 Sobic003G101400 Sobic003G229500--Sobic003G101400 Sobic001G196500 Sobic001G196500 Sobic003G229500--Sobic001G196500 Sobic002G042600 Sobic002G042600 Sobic003G229500--Sobic002G042600 Sobic001G363500 Sobic001G363500 Sobic003G229500--Sobic001G363500 Sobic001G347500 Sobic001G347500 Sobic003G229500--Sobic001G347500 Sobic003G072200 Sobic003G072200 Sobic003G229500--Sobic003G072200 Sobic001G540400 Sobic001G540400 Sobic003G229500--Sobic001G540400 Sobic008G132600--Sobic003G101400 Sobic003G422500 Sobic003G422500 Sobic008G132600--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic008G132600--Sobic002G411600 Sobic008G132600--Sobic003G229500 Sobic009G191000 Sobic009G191000 Sobic008G132600--Sobic009G191000 Sobic009G027300 Sobic009G027300 Sobic008G132600--Sobic009G027300 Sobic008G132600--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic008G132600--Sobic002G008900 Sobic010G247800 Sobic010G247800 Sobic008G132600--Sobic010G247800 Sobic007G062800--Sobic001G540400 Sobic005G112300 Sobic005G112300 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic007G062800--Sobic002G008900 Sobic010G010700 Sobic010G010700 Sobic007G062800--Sobic010G010700 Sobic004G242400 Sobic004G242400 Sobic007G062800--Sobic004G242400 Sobic004G034900 Sobic004G034900 Sobic007G062800--Sobic004G034900 Sobic004G276400 Sobic004G276400 Sobic007G062800--Sobic004G276400 Sobic002G397500 Sobic002G397500 Sobic007G062800--Sobic002G397500 Sobic003G101400--Sobic008G132600 Sobic003G101400--Sobic003G422500 Sobic003G101400--Sobic002G411600 Sobic003G101400--Sobic007G062800 Sobic003G101400--Sobic001G540400 Sobic003G101400--Sobic009G191000 Sobic003G101400--Sobic002G008900 Sobic001G290100 Sobic001G290100 Sobic003G101400--Sobic001G290100 Sobic003G101400--Sobic003G229500 Sobic001G196500--Sobic003G229500 Sobic002G299700 Sobic002G299700 Sobic001G196500--Sobic002G299700 Sobic010G275500 Sobic010G275500 Sobic001G196500--Sobic010G275500 Sobic001G196500--Sobic008G132600 Sobic001G196500--Sobic003G101400 Sobic001G196500--Sobic001G540400 Sobic003G408600 Sobic003G408600 Sobic001G196500--Sobic003G408600 Sobic001G196500--Sobic002G397500 Sobic001G457900 Sobic001G457900 Sobic001G196500--Sobic001G457900 Sobic001G065100 Sobic001G065100 Sobic002G042600--Sobic001G065100 Sobic006G184900 Sobic006G184900 Sobic002G042600--Sobic006G184900 Sobic008G098900 Sobic008G098900 Sobic002G042600--Sobic008G098900 Sobic002G401500 Sobic002G401500 Sobic002G042600--Sobic002G401500 Sobic002G179400 Sobic002G179400 Sobic002G042600--Sobic002G179400 Sobic004G322400 Sobic004G322400 Sobic002G042600--Sobic004G322400 Sobic002G429300 Sobic002G429300 Sobic002G042600--Sobic002G429300 Sobic008G088872 Sobic008G088872 Sobic002G042600--Sobic008G088872 Sobic001G370900 Sobic001G370900 Sobic002G042600--Sobic001G370900 Sobic001G363500--Sobic005G112300 Sobic001G363500--Sobic007G062800 Sobic001G363500--Sobic010G247800 Sobic001G363500--Sobic002G299700 Sobic010G112100 Sobic010G112100 Sobic001G363500--Sobic010G112100 Sobic001G363500--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic001G363500--Sobic001G433800 Sobic010G279450 Sobic010G279450 Sobic001G363500--Sobic010G279450 Sobic010G139000 Sobic010G139000 Sobic001G363500--Sobic010G139000 Sobic001G347500--Sobic003G072200 Sobic008G099800 Sobic008G099800 Sobic001G347500--Sobic008G099800 Sobic001G347500--Sobic003G229500 Sobic009G084900 Sobic009G084900 Sobic001G347500--Sobic009G084900 Sobic001G273700 Sobic001G273700 Sobic001G347500--Sobic001G273700 Sobic001G534800 Sobic001G534800 Sobic001G347500--Sobic001G534800 Sobic006G012500 Sobic006G012500 Sobic001G347500--Sobic006G012500 Sobic001G347500--Sobic010G275500 Sobic007G098500 Sobic007G098500 Sobic001G347500--Sobic007G098500 Sobic003G072200--Sobic002G397500 Sobic003G072200--Sobic007G098500 Sobic003G072200--Sobic007G062800 Sobic003G233400 Sobic003G233400 Sobic003G072200--Sobic003G233400 Sobic003G072200--Sobic009G084900 Sobic003G072200--Sobic008G098900 Sobic003G072200--Sobic005G112300 Sobic003G072200--Sobic001G347500 Sobic002G133300 Sobic002G133300 Sobic003G072200--Sobic002G133300 Sobic001G289600 Sobic001G289600 Sobic001G540400--Sobic001G289600 Sobic001G540400--Sobic003G408600 Sobic001G540400--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic001G540400--Sobic005G008800 Sobic001G540400--Sobic004G034900 Sobic001G540400--Sobic005G112300 Sobic001G540400--Sobic003G422500 Sobic001G540400--Sobic002G397500 Sobic001G540400--Sobic010G112100
Octagon: transcription factors


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