Gene annotation
Transcriptome id Sobic.003G390800.4,Sobic.003G390800.2,Sobic.003G390800.5,Sobic.003G390800.3
Synonym Sb03g042830
Functional annotation lipase, putative, expressed
UniProt A0A1W0W0Y8 , A0A1W0W0Z5 , A0A1W0W0Y5
Pfam PF01764
Panther DB PTHR21493 PTHR21493:SF140
NCBI CDD KOG2088; Predicted lipase/calmodulin-binding heat-shock protein
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT1G05790 : lipase class 3 family protein
RAP-DB (Rice) LOC_Os01g67420.1 : lipase, putative, expressed
MaizeGDB (Corn) Zm00025a026410
Brachypodium KQK11042 , KQK11041 , PNT73388
Barley HORVU3Hr1G089130.9 , HORVU3Hr1G089130.18 , HORVU3Hr1G089130.19 , HORVU3Hr1G089130.14 , HORVU3Hr1G089130.15 , HORVU3Hr1G089130.16 , HORVU3Hr1G089130.17 , HORVU3Hr1G089130.10 , HORVU3Hr1G089130.11 , HORVU3Hr1G089130.12 , HORVU3Hr1G089130.13 , HORVU3Hr1G089130.21 , HORVU3Hr1G089130.20 , HORVU3Hr1G089130.23 , HORVU3Hr1G089130.22 , HORVU3Hr1G089130.25 , HORVU3Hr1G089130.24 , HORVU3Hr1G089130.27 , HORVU3Hr1G089130.26 , HORVU3Hr1G089130.29 , HORVU3Hr1G089130.28 , HORVU3Hr1G089130.30 , HORVU3Hr1G089130.6 , HORVU3Hr1G089130.7 , HORVU3Hr1G089130.4 , HORVU3Hr1G089130.5 , HORVU3Hr1G089130.2 , HORVU3Hr1G089130.1 , HORVU3Hr1G089130.8
Wheat TraesCS3A02G395400 , TraesCS3A02G395400 , TraesCS3A02G395400 , TraesCS3B02G427200 , TraesCS3B02G427200 , TraesCS3B02G427200 , TraesCS3D02G389000 , TraesCS3D02G389000 , TraesCS3D02G389000
Populus -


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cDNA sequences
Sobic.003G390800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G401800 expressed protein -
2 Sobic.001G371700 zinc finger protein, putative, expressed -
3 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
5 Sobic.008G078000 EDM2, putative, expressed -
6 Sobic.008G090400 - -
7 Sobic.008G114700 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
9 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
10 Sobic.005G064100 expressed protein -
11 Sobic.003G331000 exostosin family domain containing protein, expressed -
12 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
13 Sobic.009G031500 agenet domain containing protein, putative, expressed -
14 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
15 Sobic.001G199500 heat shock protein DnaJ, putative, expressed K09531: DnaJ homolog subfamily C member 11
16 Sobic.008G101900 plastid division regulator MinE, putative, expressed -
17 Sobic.008G125100 Mur ligase family protein, putative, expressed -
18 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
19 Sobic.006G071628 - -
20 Sobic.003G024000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide-N4-asparagine amidase A, putative, expressed -


Gene co-expression network
sample Sobic003G390800 Sobic003G390800 Sobic003G401800 Sobic003G401800 Sobic003G390800--Sobic003G401800 Sobic001G371700 Sobic001G371700 Sobic003G390800--Sobic001G371700 Sobic002G377300 Sobic002G377300 Sobic003G390800--Sobic002G377300 Sobic003G078300 Sobic003G078300 Sobic003G390800--Sobic003G078300 Sobic008G078000 Sobic008G078000 Sobic003G390800--Sobic008G078000 Sobic008G090400 Sobic008G090400 Sobic003G390800--Sobic008G090400 Sobic008G114700 Sobic008G114700 Sobic003G390800--Sobic008G114700 Sobic009G231100 Sobic009G231100 Sobic003G390800--Sobic009G231100 Sobic007G000700 Sobic007G000700 Sobic003G390800--Sobic007G000700 Sobic003G401800--Sobic007G000700 Sobic003G226700 Sobic003G226700 Sobic003G401800--Sobic003G226700 Sobic003G401800--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G401800--Sobic010G211800 Sobic002G320600 Sobic002G320600 Sobic003G401800--Sobic002G320600 Sobic009G128800 Sobic009G128800 Sobic003G401800--Sobic009G128800 Sobic001G437500 Sobic001G437500 Sobic003G401800--Sobic001G437500 Sobic001G425700 Sobic001G425700 Sobic003G401800--Sobic001G425700 Sobic010G165900 Sobic010G165900 Sobic003G401800--Sobic010G165900 Sobic001G371700--Sobic002G377300 Sobic004G118800 Sobic004G118800 Sobic001G371700--Sobic004G118800 Sobic001G371700--Sobic003G078300 Sobic008G101900 Sobic008G101900 Sobic001G371700--Sobic008G101900 Sobic006G257200 Sobic006G257200 Sobic001G371700--Sobic006G257200 Sobic001G047200 Sobic001G047200 Sobic001G371700--Sobic001G047200 Sobic002G272400 Sobic002G272400 Sobic001G371700--Sobic002G272400 Sobic002G311000 Sobic002G311000 Sobic001G371700--Sobic002G311000 Sobic003G223000 Sobic003G223000 Sobic001G371700--Sobic003G223000 Sobic009G055900 Sobic009G055900 Sobic002G377300--Sobic009G055900 Sobic002G377300--Sobic001G371700 Sobic010G165100 Sobic010G165100 Sobic002G377300--Sobic010G165100 Sobic002G142500 Sobic002G142500 Sobic002G377300--Sobic002G142500 Sobic002G377300--Sobic009G231100 Sobic002G377300--Sobic001G047200 Sobic008G143600 Sobic008G143600 Sobic002G377300--Sobic008G143600 Sobic002G225000 Sobic002G225000 Sobic002G377300--Sobic002G225000 Sobic002G246000 Sobic002G246000 Sobic002G377300--Sobic002G246000 Sobic003G078300--Sobic002G311000 Sobic004G253500 Sobic004G253500 Sobic003G078300--Sobic004G253500 Sobic001G461800 Sobic001G461800 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic003G078300--Sobic006G257200 Sobic003G291000 Sobic003G291000 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G250000 Sobic003G250000 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic001G465500 Sobic001G465500 Sobic008G078000--Sobic001G465500 Sobic005G017000 Sobic005G017000 Sobic008G078000--Sobic005G017000 Sobic003G331000 Sobic003G331000 Sobic008G078000--Sobic003G331000 Sobic003G343200 Sobic003G343200 Sobic008G078000--Sobic003G343200 Sobic005G160200 Sobic005G160200 Sobic008G078000--Sobic005G160200 Sobic002G123600 Sobic002G123600 Sobic008G078000--Sobic002G123600 Sobic008G078000--Sobic004G118800 Sobic010G222800 Sobic010G222800 Sobic008G078000--Sobic010G222800 Sobic002G239601 Sobic002G239601 Sobic008G078000--Sobic002G239601 Sobic008G090400--Sobic002G123600 Sobic002G095300 Sobic002G095300 Sobic008G090400--Sobic002G095300 Sobic010G087100 Sobic010G087100 Sobic008G090400--Sobic010G087100 Sobic008G118100 Sobic008G118100 Sobic008G090400--Sobic008G118100 Sobic006G127200 Sobic006G127200 Sobic008G090400--Sobic006G127200 Sobic002G187600 Sobic002G187600 Sobic008G090400--Sobic002G187600 Sobic008G090400--Sobic003G331000 Sobic001G242500 Sobic001G242500 Sobic008G090400--Sobic001G242500 Sobic004G306100 Sobic004G306100 Sobic008G090400--Sobic004G306100 Sobic008G114700--Sobic002G377300 Sobic008G114700--Sobic003G390800 Sobic008G114700--Sobic004G253500 Sobic004G243800 Sobic004G243800 Sobic008G114700--Sobic004G243800 Sobic001G534300 Sobic001G534300 Sobic008G114700--Sobic001G534300 Sobic005G022000 Sobic005G022000 Sobic008G114700--Sobic005G022000 Sobic008G075200 Sobic008G075200 Sobic008G114700--Sobic008G075200 Sobic008G174966 Sobic008G174966 Sobic008G114700--Sobic008G174966 Sobic009G151000 Sobic009G151000 Sobic008G114700--Sobic009G151000 Sobic009G201900 Sobic009G201900 Sobic009G231100--Sobic009G201900 Sobic009G231100--Sobic002G225000 Sobic009G231100--Sobic002G377300 Sobic001G518200 Sobic001G518200 Sobic009G231100--Sobic001G518200 Sobic003G420900 Sobic003G420900 Sobic009G231100--Sobic003G420900 Sobic009G231100--Sobic003G223000 Sobic005G031000 Sobic005G031000 Sobic009G231100--Sobic005G031000 Sobic001G104300 Sobic001G104300 Sobic009G231100--Sobic001G104300 Sobic009G231100--Sobic005G022000 Sobic007G000700--Sobic003G401800 Sobic006G081000 Sobic006G081000 Sobic007G000700--Sobic006G081000 Sobic007G000700--Sobic003G226700 Sobic007G000700--Sobic002G320600 Sobic010G092400 Sobic010G092400 Sobic007G000700--Sobic010G092400 Sobic010G078300 Sobic010G078300 Sobic007G000700--Sobic010G078300 Sobic007G000700--Sobic003G078300 Sobic005G062600 Sobic005G062600 Sobic007G000700--Sobic005G062600 Sobic003G289800 Sobic003G289800 Sobic007G000700--Sobic003G289800
Octagon: transcription factors


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