Hb_154646_010

Information

Type -
Description -
Location Contig154646: 114-371
Sequence    

Annotation

kegg
ID rcu:RCOM_0574920
description kinase, putative (EC:2.7.10.1)
nr
ID XP_012066381.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID Q8RWZ5
description G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154646_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_001817_070 0.0029014501 - - nucleic acid binding protein, putative [Ricinus communis]
3 Hb_000135_040 0.0105351217 - - PREDICTED: putative F-box/FBD/LRR-repeat protein At5g56810 [Jatropha curcas]
4 Hb_008953_020 0.01072715 - - hypothetical protein EUGRSUZ_C03826 [Eucalyptus grandis]
5 Hb_008221_010 0.0156480878 - - hypothetical protein JCGZ_10961 [Jatropha curcas]
6 Hb_000238_010 0.0174507243 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_013654_020 0.0192842016 - - putative prolin-rich extensin-like receptor protein kinase family protein [Zea mays]
8 Hb_002154_090 0.0194131883 - - -
9 Hb_048653_010 0.019426457 - - PREDICTED: mavicyanin [Jatropha curcas]
10 Hb_042239_010 0.0206889248 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
11 Hb_000370_050 0.0249662241 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
12 Hb_003702_020 0.0250017477 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
13 Hb_008092_010 0.0254455001 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
14 Hb_007592_010 0.0275914458 - - PREDICTED: uncharacterized protein LOC105118874 [Populus euphratica]
15 Hb_005426_010 0.0277455833 - - polyprotein [Oryza australiensis]
16 Hb_002342_040 0.0381268822 - - FERONIA, partial [Arabis alpina]
17 Hb_175426_010 0.0426461216 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
18 Hb_122911_010 0.0453245777 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Jatropha curcas]
19 Hb_000045_270 0.0510050894 - - conserved hypothetical protein [Ricinus communis]
20 Hb_039814_010 0.0520986045 - - hypothetical protein JCGZ_05023 [Jatropha curcas]

Gene co-expression network

sample Hb_154646_010 Hb_154646_010 Hb_001817_070 Hb_001817_070 Hb_154646_010--Hb_001817_070 Hb_000135_040 Hb_000135_040 Hb_154646_010--Hb_000135_040 Hb_008953_020 Hb_008953_020 Hb_154646_010--Hb_008953_020 Hb_008221_010 Hb_008221_010 Hb_154646_010--Hb_008221_010 Hb_000238_010 Hb_000238_010 Hb_154646_010--Hb_000238_010 Hb_013654_020 Hb_013654_020 Hb_154646_010--Hb_013654_020 Hb_001817_070--Hb_000135_040 Hb_001817_070--Hb_008953_020 Hb_001817_070--Hb_008221_010 Hb_001817_070--Hb_013654_020 Hb_048653_010 Hb_048653_010 Hb_001817_070--Hb_048653_010 Hb_000135_040--Hb_008953_020 Hb_000135_040--Hb_008221_010 Hb_000135_040--Hb_013654_020 Hb_000135_040--Hb_048653_010 Hb_042239_010 Hb_042239_010 Hb_000135_040--Hb_042239_010 Hb_008953_020--Hb_008221_010 Hb_008953_020--Hb_013654_020 Hb_008953_020--Hb_048653_010 Hb_008953_020--Hb_042239_010 Hb_008221_010--Hb_013654_020 Hb_008221_010--Hb_048653_010 Hb_008221_010--Hb_042239_010 Hb_000370_050 Hb_000370_050 Hb_008221_010--Hb_000370_050 Hb_002154_090 Hb_002154_090 Hb_000238_010--Hb_002154_090 Hb_000238_010--Hb_001817_070 Hb_175426_010 Hb_175426_010 Hb_000238_010--Hb_175426_010 Hb_000238_010--Hb_000135_040 Hb_000238_010--Hb_008953_020 Hb_013654_020--Hb_048653_010 Hb_013654_020--Hb_042239_010 Hb_013654_020--Hb_000370_050 Hb_003702_020 Hb_003702_020 Hb_013654_020--Hb_003702_020 Hb_008092_010 Hb_008092_010 Hb_013654_020--Hb_008092_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 7.64423 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 3.79252 0

CAGE analysis