Hb_008221_010

Information

Type -
Description -
Location Contig8221: 2403-2836
Sequence    

Annotation

kegg
ID tcc:TCM_031963
description hypothetical protein
nr
ID KDP46652.1
description hypothetical protein JCGZ_10961 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LE08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10961 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008221_010 0.0 - - hypothetical protein JCGZ_10961 [Jatropha curcas]
2 Hb_013654_020 0.0036366091 - - putative prolin-rich extensin-like receptor protein kinase family protein [Zea mays]
3 Hb_048653_010 0.0037788878 - - PREDICTED: mavicyanin [Jatropha curcas]
4 Hb_008953_020 0.0049213073 - - hypothetical protein EUGRSUZ_C03826 [Eucalyptus grandis]
5 Hb_042239_010 0.0050415749 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
6 Hb_000135_040 0.0051133431 - - PREDICTED: putative F-box/FBD/LRR-repeat protein At5g56810 [Jatropha curcas]
7 Hb_000370_050 0.00931979 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
8 Hb_003702_020 0.0093553224 - - PREDICTED: phospholipase A1-IIgamma-like [Jatropha curcas]
9 Hb_008092_010 0.0097991855 - - PREDICTED: uncharacterized protein LOC105635099 [Jatropha curcas]
10 Hb_007592_010 0.0119457073 - - PREDICTED: uncharacterized protein LOC105118874 [Populus euphratica]
11 Hb_005426_010 0.0120998888 - - polyprotein [Oryza australiensis]
12 Hb_001817_070 0.0127468944 - - nucleic acid binding protein, putative [Ricinus communis]
13 Hb_154646_010 0.0156480878 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
14 Hb_002342_040 0.0224849766 - - FERONIA, partial [Arabis alpina]
15 Hb_122911_010 0.0296862716 - - PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Jatropha curcas]
16 Hb_000238_010 0.0330948859 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_002154_090 0.0350566585 - - -
18 Hb_000045_270 0.0353702017 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010452_030 0.0380607349 transcription factor TF Family: MYB Myb domain protein 107 [Theobroma cacao]
20 Hb_001100_020 0.03937774 - - -

Gene co-expression network

sample Hb_008221_010 Hb_008221_010 Hb_013654_020 Hb_013654_020 Hb_008221_010--Hb_013654_020 Hb_048653_010 Hb_048653_010 Hb_008221_010--Hb_048653_010 Hb_008953_020 Hb_008953_020 Hb_008221_010--Hb_008953_020 Hb_042239_010 Hb_042239_010 Hb_008221_010--Hb_042239_010 Hb_000135_040 Hb_000135_040 Hb_008221_010--Hb_000135_040 Hb_000370_050 Hb_000370_050 Hb_008221_010--Hb_000370_050 Hb_013654_020--Hb_048653_010 Hb_013654_020--Hb_042239_010 Hb_013654_020--Hb_000370_050 Hb_003702_020 Hb_003702_020 Hb_013654_020--Hb_003702_020 Hb_008092_010 Hb_008092_010 Hb_013654_020--Hb_008092_010 Hb_048653_010--Hb_042239_010 Hb_048653_010--Hb_000370_050 Hb_048653_010--Hb_003702_020 Hb_048653_010--Hb_008092_010 Hb_008953_020--Hb_000135_040 Hb_001817_070 Hb_001817_070 Hb_008953_020--Hb_001817_070 Hb_008953_020--Hb_013654_020 Hb_008953_020--Hb_048653_010 Hb_008953_020--Hb_042239_010 Hb_042239_010--Hb_000370_050 Hb_042239_010--Hb_003702_020 Hb_042239_010--Hb_008092_010 Hb_000135_040--Hb_001817_070 Hb_000135_040--Hb_013654_020 Hb_000135_040--Hb_048653_010 Hb_000135_040--Hb_042239_010 Hb_000370_050--Hb_003702_020 Hb_000370_050--Hb_008092_010 Hb_007592_010 Hb_007592_010 Hb_000370_050--Hb_007592_010 Hb_005426_010 Hb_005426_010 Hb_000370_050--Hb_005426_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.323868 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.148503 0

CAGE analysis