Hb_153199_010

Information

Type -
Description -
Location Contig153199: 27-348
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_153199_010 0.0 - - -
2 Hb_007432_040 0.0111449569 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
3 Hb_004032_170 0.0119020826 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
4 Hb_002235_340 0.013091994 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
5 Hb_000530_080 0.0137326667 - - PREDICTED: serine/threonine-protein kinase D6PKL2-like [Jatropha curcas]
6 Hb_001817_050 0.0160937543 transcription factor TF Family: C2H2 PREDICTED: transcriptional regulator SUPERMAN [Jatropha curcas]
7 Hb_000733_170 0.0170889543 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
8 Hb_001591_020 0.0229659997 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
9 Hb_001892_040 0.0281062882 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
10 Hb_000203_130 0.0286781405 - - -
11 Hb_000103_210 0.0340580753 - - PREDICTED: protein lin-12-like isoform X1 [Populus euphratica]
12 Hb_001322_200 0.0389631733 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005976_030 0.0408836213 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
14 Hb_000258_010 0.0458803424 - - lipid transfer precursor protein [Hevea brasiliensis]
15 Hb_000389_130 0.05665805 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
16 Hb_069237_010 0.0580155009 - - -
17 Hb_118941_010 0.0637259226 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
18 Hb_003729_040 0.0637674788 - - o-methyltransferase, putative [Ricinus communis]
19 Hb_000325_090 0.0638369946 transcription factor TF Family: bHLH PREDICTED: transcription factor PRE5-like [Gossypium raimondii]
20 Hb_003092_010 0.0671012014 - - hypothetical protein POPTR_0025s00750g [Populus trichocarpa]

Gene co-expression network

sample Hb_153199_010 Hb_153199_010 Hb_007432_040 Hb_007432_040 Hb_153199_010--Hb_007432_040 Hb_004032_170 Hb_004032_170 Hb_153199_010--Hb_004032_170 Hb_002235_340 Hb_002235_340 Hb_153199_010--Hb_002235_340 Hb_000530_080 Hb_000530_080 Hb_153199_010--Hb_000530_080 Hb_001817_050 Hb_001817_050 Hb_153199_010--Hb_001817_050 Hb_000733_170 Hb_000733_170 Hb_153199_010--Hb_000733_170 Hb_007432_040--Hb_004032_170 Hb_007432_040--Hb_000530_080 Hb_007432_040--Hb_000733_170 Hb_001591_020 Hb_001591_020 Hb_007432_040--Hb_001591_020 Hb_001892_040 Hb_001892_040 Hb_007432_040--Hb_001892_040 Hb_004032_170--Hb_000530_080 Hb_004032_170--Hb_000733_170 Hb_004032_170--Hb_001591_020 Hb_004032_170--Hb_001892_040 Hb_002235_340--Hb_001817_050 Hb_000203_130 Hb_000203_130 Hb_002235_340--Hb_000203_130 Hb_000103_210 Hb_000103_210 Hb_002235_340--Hb_000103_210 Hb_002235_340--Hb_007432_040 Hb_002235_340--Hb_004032_170 Hb_000530_080--Hb_000733_170 Hb_000530_080--Hb_001591_020 Hb_000530_080--Hb_001892_040 Hb_001817_050--Hb_000203_130 Hb_001817_050--Hb_000103_210 Hb_001322_200 Hb_001322_200 Hb_001817_050--Hb_001322_200 Hb_001817_050--Hb_007432_040 Hb_000733_170--Hb_001591_020 Hb_000733_170--Hb_001892_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.374228 21.8975 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis