Hb_011781_050

Information

Type -
Description -
Location Contig11781: 81586-82302
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011781_050 0.0 - - -
2 Hb_002307_060 0.0133175903 - - -
3 Hb_000290_010 0.0162891589 - - -
4 Hb_000089_230 0.0312857266 - - PREDICTED: uncharacterized protein LOC105772114 [Gossypium raimondii]
5 Hb_003384_050 0.0323708992 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_002805_080 0.0382701896 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
7 Hb_003494_250 0.0399795582 - - -
8 Hb_000105_090 0.0400285894 - - -
9 Hb_001631_120 0.0412794537 - - unnamed protein product [Vitis vinifera]
10 Hb_000705_310 0.0422913409 - - hypothetical protein POPTR_0001s03390g [Populus trichocarpa]
11 Hb_001217_030 0.0821981269 - - -
12 Hb_005357_190 0.0830591501 - - Protein COBRA precursor, putative [Ricinus communis]
13 Hb_003462_130 0.1035779843 - - -
14 Hb_004021_110 0.1078134916 - - -
15 Hb_003053_040 0.1206868299 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
16 Hb_001032_040 0.1776222966 - - PREDICTED: psbP-like protein 1, chloroplastic [Jatropha curcas]
17 Hb_001486_110 0.1835220056 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Jatropha curcas]
18 Hb_105478_010 0.2178753369 - - PREDICTED: uncharacterized protein LOC105762101 [Gossypium raimondii]
19 Hb_101393_010 0.222583805 - - conserved hypothetical protein [Ricinus communis]
20 Hb_131621_010 0.2313168047 - - hypothetical protein MIMGU_mgv1a004274mg [Erythranthe guttata]

Gene co-expression network

sample Hb_011781_050 Hb_011781_050 Hb_002307_060 Hb_002307_060 Hb_011781_050--Hb_002307_060 Hb_000290_010 Hb_000290_010 Hb_011781_050--Hb_000290_010 Hb_000089_230 Hb_000089_230 Hb_011781_050--Hb_000089_230 Hb_003384_050 Hb_003384_050 Hb_011781_050--Hb_003384_050 Hb_002805_080 Hb_002805_080 Hb_011781_050--Hb_002805_080 Hb_003494_250 Hb_003494_250 Hb_011781_050--Hb_003494_250 Hb_002307_060--Hb_000290_010 Hb_002307_060--Hb_000089_230 Hb_002307_060--Hb_003384_050 Hb_002307_060--Hb_002805_080 Hb_000105_090 Hb_000105_090 Hb_002307_060--Hb_000105_090 Hb_000290_010--Hb_000089_230 Hb_000290_010--Hb_003384_050 Hb_000290_010--Hb_002805_080 Hb_000290_010--Hb_000105_090 Hb_000089_230--Hb_003384_050 Hb_000089_230--Hb_002805_080 Hb_000089_230--Hb_000105_090 Hb_001631_120 Hb_001631_120 Hb_000089_230--Hb_001631_120 Hb_000705_310 Hb_000705_310 Hb_000089_230--Hb_000705_310 Hb_003384_050--Hb_002805_080 Hb_003384_050--Hb_000105_090 Hb_003384_050--Hb_001631_120 Hb_003384_050--Hb_000705_310 Hb_002805_080--Hb_000105_090 Hb_002805_080--Hb_001631_120 Hb_002805_080--Hb_000705_310 Hb_001217_030 Hb_001217_030 Hb_003494_250--Hb_001217_030 Hb_005357_190 Hb_005357_190 Hb_003494_250--Hb_005357_190 Hb_003494_250--Hb_002307_060 Hb_003494_250--Hb_000290_010 Hb_003462_130 Hb_003462_130 Hb_003494_250--Hb_003462_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.280533 0 0 0.270209
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis