Hb_007963_040

Information

Type -
Description -
Location Contig7963: 51630-52829
Sequence    

Annotation

kegg
ID rcu:RCOM_0495460
description dopamine beta-monooxygenase, putative
nr
ID XP_002532009.1
description dopamine beta-monooxygenase, putative [Ricinus communis]
swissprot
ID Q9SJ74
description Cytochrome b561 and DOMON domain-containing protein At2g04850 OS=Arabidopsis thaliana GN=At2g04850 PE=2 SV=2
trembl
ID B9T190
description Dopamine beta-monooxygenase, putative OS=Ricinus communis GN=RCOM_0495460 PE=4 SV=1
Gene Ontology
ID GO:0016021
description cytochrome b561 and domon domain-containing protein at2g04850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58577: 51475-52865
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007963_040 0.0 - - dopamine beta-monooxygenase, putative [Ricinus communis]
2 Hb_000479_200 0.1447216988 - - PREDICTED: uncharacterized protein LOC105644128 [Jatropha curcas]
3 Hb_017110_010 0.1450623088 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At1g55760 [Jatropha curcas]
4 Hb_000363_160 0.1522340703 - - Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis]
5 Hb_000281_110 0.1576485948 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
6 Hb_003032_010 0.158197745 - - PREDICTED: probable inactive receptor kinase At2g26730 [Jatropha curcas]
7 Hb_032215_050 0.1584427544 - - Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis]
8 Hb_003943_040 0.173164515 - - DNA binding protein, putative [Ricinus communis]
9 Hb_002299_060 0.1749408712 transcription factor TF Family: FAR1 PREDICTED: probable receptor-like protein kinase At2g39360 [Jatropha curcas]
10 Hb_000134_110 0.1750818589 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Vitis vinifera]
11 Hb_000031_030 0.1759294607 - - PREDICTED: plasma membrane ATPase 4 [Jatropha curcas]
12 Hb_000260_120 0.1795344743 - - DNA binding protein, putative [Ricinus communis]
13 Hb_005918_040 0.1800611561 - - hypothetical protein POPTR_0003s04560g [Populus trichocarpa]
14 Hb_000162_260 0.1838024531 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Nelumbo nucifera]
15 Hb_002498_100 0.1856041621 - - bcr-associated protein, bap, putative [Ricinus communis]
16 Hb_000444_090 0.1859322446 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001439_200 0.1863399754 - - Transmembrane protein Tmp21 precursor, putative [Ricinus communis]
18 Hb_174541_020 0.1874233904 - - PREDICTED: cysteine proteinase inhibitor 6-like [Populus euphratica]
19 Hb_001433_220 0.1876528104 - - protein phosphatase, putative [Ricinus communis]
20 Hb_010174_020 0.188838635 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_007963_040 Hb_007963_040 Hb_000479_200 Hb_000479_200 Hb_007963_040--Hb_000479_200 Hb_017110_010 Hb_017110_010 Hb_007963_040--Hb_017110_010 Hb_000363_160 Hb_000363_160 Hb_007963_040--Hb_000363_160 Hb_000281_110 Hb_000281_110 Hb_007963_040--Hb_000281_110 Hb_003032_010 Hb_003032_010 Hb_007963_040--Hb_003032_010 Hb_032215_050 Hb_032215_050 Hb_007963_040--Hb_032215_050 Hb_000479_200--Hb_003032_010 Hb_003943_040 Hb_003943_040 Hb_000479_200--Hb_003943_040 Hb_000479_200--Hb_017110_010 Hb_011316_040 Hb_011316_040 Hb_000479_200--Hb_011316_040 Hb_001975_140 Hb_001975_140 Hb_000479_200--Hb_001975_140 Hb_000173_290 Hb_000173_290 Hb_000479_200--Hb_000173_290 Hb_000629_120 Hb_000629_120 Hb_017110_010--Hb_000629_120 Hb_181288_020 Hb_181288_020 Hb_017110_010--Hb_181288_020 Hb_000161_060 Hb_000161_060 Hb_017110_010--Hb_000161_060 Hb_017110_010--Hb_003032_010 Hb_000138_110 Hb_000138_110 Hb_017110_010--Hb_000138_110 Hb_000363_160--Hb_003943_040 Hb_000359_010 Hb_000359_010 Hb_000363_160--Hb_000359_010 Hb_005625_020 Hb_005625_020 Hb_000363_160--Hb_005625_020 Hb_002687_110 Hb_002687_110 Hb_000363_160--Hb_002687_110 Hb_000029_020 Hb_000029_020 Hb_000363_160--Hb_000029_020 Hb_000898_050 Hb_000898_050 Hb_000363_160--Hb_000898_050 Hb_000554_010 Hb_000554_010 Hb_000281_110--Hb_000554_010 Hb_003206_070 Hb_003206_070 Hb_000281_110--Hb_003206_070 Hb_000281_110--Hb_003032_010 Hb_001454_130 Hb_001454_130 Hb_000281_110--Hb_001454_130 Hb_001633_130 Hb_001633_130 Hb_000281_110--Hb_001633_130 Hb_000169_090 Hb_000169_090 Hb_000281_110--Hb_000169_090 Hb_000069_110 Hb_000069_110 Hb_003032_010--Hb_000069_110 Hb_010655_010 Hb_010655_010 Hb_003032_010--Hb_010655_010 Hb_003032_010--Hb_002687_110 Hb_032264_110 Hb_032264_110 Hb_003032_010--Hb_032264_110 Hb_032215_050--Hb_003943_040 Hb_000080_190 Hb_000080_190 Hb_032215_050--Hb_000080_190 Hb_032215_050--Hb_003206_070 Hb_002903_090 Hb_002903_090 Hb_032215_050--Hb_002903_090 Hb_004724_420 Hb_004724_420 Hb_032215_050--Hb_004724_420 Hb_032215_050--Hb_002687_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
99.9539 5.84507 6.10908 148.464 114.153 118.682
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
78.7472 96.7932 164.21 18.9461 58.6492

CAGE analysis