Hb_002383_060

Information

Type -
Description -
Location Contig2383: 53723-55134
Sequence    

Annotation

kegg
ID sot:102596491
description uncharacterized LOC102596491
nr
ID XP_006340515.1
description PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
swissprot
ID -
description -
trembl
ID A0A067KID3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14824 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002383_060 0.0 - - PREDICTED: uncharacterized protein LOC102596491 [Solanum tuberosum]
2 Hb_000861_090 0.3235991565 - - -
3 Hb_020111_010 0.327701992 - - PREDICTED: uncharacterized protein LOC102661177 [Glycine max]
4 Hb_004147_050 0.3277147258 - - hypothetical protein JCGZ_03640 [Jatropha curcas]
5 Hb_001013_020 0.3311794589 - - conserved hypothetical protein [Ricinus communis]
6 Hb_011010_010 0.3335895393 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
7 Hb_003506_060 0.3336173453 - - PREDICTED: glutathione S-transferase F9-like [Jatropha curcas]
8 Hb_011639_140 0.3336501655 transcription factor TF Family: M-type hypothetical protein JCGZ_09931 [Jatropha curcas]
9 Hb_000640_010 0.3339876205 - - PREDICTED: histidine kinase CKI1 [Jatropha curcas]
10 Hb_002659_100 0.3347628628 - - hypothetical protein OsI_37193 [Oryza sativa Indica Group]
11 Hb_111985_020 0.3350544309 - - -
12 Hb_006642_010 0.3496376128 - - -
13 Hb_009181_020 0.360266611 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
14 Hb_031089_060 0.3604214823 - - -
15 Hb_000866_160 0.3612865942 - - PREDICTED: elicitor-responsive protein 3 [Populus euphratica]
16 Hb_003147_030 0.376969445 transcription factor TF Family: Jumonji transcription factor, putative [Ricinus communis]
17 Hb_138358_010 0.3770759074 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
18 Hb_004642_010 0.3772413479 - - Integrase core domain, putative [Oryza sativa Japonica Group]
19 Hb_000270_570 0.3784101074 - - PREDICTED: peroxidase 65-like [Jatropha curcas]
20 Hb_004724_110 0.3788700766 - - alpha-1,2-fucosyltransferase [Populus tremula x Populus alba]

Gene co-expression network

sample Hb_002383_060 Hb_002383_060 Hb_000861_090 Hb_000861_090 Hb_002383_060--Hb_000861_090 Hb_020111_010 Hb_020111_010 Hb_002383_060--Hb_020111_010 Hb_004147_050 Hb_004147_050 Hb_002383_060--Hb_004147_050 Hb_001013_020 Hb_001013_020 Hb_002383_060--Hb_001013_020 Hb_011010_010 Hb_011010_010 Hb_002383_060--Hb_011010_010 Hb_003506_060 Hb_003506_060 Hb_002383_060--Hb_003506_060 Hb_000005_120 Hb_000005_120 Hb_000861_090--Hb_000005_120 Hb_000011_130 Hb_000011_130 Hb_000861_090--Hb_000011_130 Hb_000046_140 Hb_000046_140 Hb_000861_090--Hb_000046_140 Hb_000081_070 Hb_000081_070 Hb_000861_090--Hb_000081_070 Hb_000171_010 Hb_000171_010 Hb_000861_090--Hb_000171_010 Hb_000189_040 Hb_000189_040 Hb_000861_090--Hb_000189_040 Hb_020111_010--Hb_004147_050 Hb_020111_010--Hb_001013_020 Hb_020111_010--Hb_011010_010 Hb_011639_140 Hb_011639_140 Hb_020111_010--Hb_011639_140 Hb_020111_010--Hb_003506_060 Hb_000640_010 Hb_000640_010 Hb_020111_010--Hb_000640_010 Hb_004147_050--Hb_001013_020 Hb_004147_050--Hb_003506_060 Hb_004147_050--Hb_011010_010 Hb_004147_050--Hb_011639_140 Hb_004147_050--Hb_000640_010 Hb_001013_020--Hb_011010_010 Hb_001013_020--Hb_011639_140 Hb_001013_020--Hb_000640_010 Hb_002659_100 Hb_002659_100 Hb_001013_020--Hb_002659_100 Hb_111985_020 Hb_111985_020 Hb_001013_020--Hb_111985_020 Hb_011010_010--Hb_011639_140 Hb_011010_010--Hb_000640_010 Hb_011010_010--Hb_002659_100 Hb_011010_010--Hb_111985_020 Hb_006642_010 Hb_006642_010 Hb_011010_010--Hb_006642_010 Hb_003506_060--Hb_001013_020 Hb_003506_060--Hb_011010_010 Hb_003506_060--Hb_011639_140 Hb_003506_060--Hb_000640_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.189137 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0588139 0 0.0477464 0

CAGE analysis