Hb_001693_040

Information

Type -
Description -
Location Contig1693: 43534-44415
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016788
description gdsl esterase lipase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001693_040 0.0 - - -
2 Hb_001987_010 0.0820813296 - - -
3 Hb_003551_030 0.0932578548 - - hypothetical protein POPTR_0016s03850g [Populus trichocarpa]
4 Hb_000205_340 0.1734745864 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
5 Hb_069783_020 0.1776512595 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
6 Hb_012424_010 0.1887947726 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
7 Hb_000296_060 0.2119116669 - - -
8 Hb_010736_030 0.2120186352 - - -
9 Hb_000276_050 0.2205375881 - - -
10 Hb_187513_010 0.2478143005 - - PREDICTED: uncharacterized protein LOC105761922 [Gossypium raimondii]
11 Hb_000705_280 0.2528265715 - - PREDICTED: uncharacterized protein LOC104601116 [Nelumbo nucifera]
12 Hb_060455_010 0.2575893746 - - 50 kDa protein [Hevea brasiliensis]
13 Hb_002571_090 0.258000866 - - -
14 Hb_008839_030 0.2611854693 - - conserved hypothetical protein [Ricinus communis]
15 Hb_143874_010 0.2769375119 - - PREDICTED: uncharacterized protein LOC105794100 [Gossypium raimondii]
16 Hb_005142_010 0.3013134144 - - -
17 Hb_005841_030 0.3022592384 - - -
18 Hb_000572_050 0.3042069053 - - PREDICTED: transcriptional adapter ADA2b isoform X1 [Cicer arietinum]
19 Hb_000038_190 0.3139581586 - - -
20 Hb_000046_150 0.3139581586 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001693_040 Hb_001693_040 Hb_001987_010 Hb_001987_010 Hb_001693_040--Hb_001987_010 Hb_003551_030 Hb_003551_030 Hb_001693_040--Hb_003551_030 Hb_000205_340 Hb_000205_340 Hb_001693_040--Hb_000205_340 Hb_069783_020 Hb_069783_020 Hb_001693_040--Hb_069783_020 Hb_012424_010 Hb_012424_010 Hb_001693_040--Hb_012424_010 Hb_000296_060 Hb_000296_060 Hb_001693_040--Hb_000296_060 Hb_001987_010--Hb_003551_030 Hb_001987_010--Hb_000205_340 Hb_001987_010--Hb_012424_010 Hb_001987_010--Hb_000296_060 Hb_001987_010--Hb_069783_020 Hb_003551_030--Hb_000205_340 Hb_003551_030--Hb_069783_020 Hb_003551_030--Hb_012424_010 Hb_003551_030--Hb_000296_060 Hb_002571_090 Hb_002571_090 Hb_000205_340--Hb_002571_090 Hb_000205_340--Hb_000296_060 Hb_000205_340--Hb_012424_010 Hb_187513_010 Hb_187513_010 Hb_069783_020--Hb_187513_010 Hb_069783_020--Hb_000296_060 Hb_069783_020--Hb_012424_010 Hb_000276_050 Hb_000276_050 Hb_069783_020--Hb_000276_050 Hb_012424_010--Hb_000296_060 Hb_012424_010--Hb_187513_010 Hb_000296_060--Hb_187513_010 Hb_000296_060--Hb_002571_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 238.897 6.44389 47.3219

CAGE analysis