Hb_000614_220

Information

Type -
Description -
Location Contig614: 136520-138977
Sequence    

Annotation

kegg
ID pop:POPTR_0010s06490g
description POPTRDRAFT_230268; hypothetical protein
nr
ID XP_012085607.1
description PREDICTED: uncharacterized protein LOC105644756 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JS40
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17909 PE=4 SV=1
Gene Ontology
ID GO:0003677
description restriction endonuclease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000614_220 0.0 - - PREDICTED: uncharacterized protein LOC105644756 [Jatropha curcas]
2 Hb_002799_110 0.0607448362 - - PREDICTED: probable protein phosphatase 2C 60 [Jatropha curcas]
3 Hb_027654_060 0.0665083935 - - RecName: Full=Probable pyridoxal 5'-phosphate synthase subunit PDX1; Short=PLP synthase subunit PDX1; AltName: Full=Ethylene-inducible protein HEVER [Hevea brasiliensis]
4 Hb_000614_160 0.0681735638 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Jatropha curcas]
5 Hb_000510_290 0.0728378012 - - PREDICTED: protein OSB2, chloroplastic-like isoform X2 [Jatropha curcas]
6 Hb_012675_050 0.0808640598 - - conserved hypothetical protein [Ricinus communis]
7 Hb_012114_070 0.083531529 - - PREDICTED: uncharacterized protein LOC105645812 [Jatropha curcas]
8 Hb_082609_010 0.0843160219 - - PREDICTED: uncharacterized protein LOC105644299 [Jatropha curcas]
9 Hb_000962_040 0.0844050493 - - heat shock protein binding protein, putative [Ricinus communis]
10 Hb_032264_070 0.0870463875 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Jatropha curcas]
11 Hb_004324_270 0.0879179184 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
12 Hb_002408_020 0.0895886659 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
13 Hb_000046_050 0.0905949008 - - PREDICTED: LEC14B homolog [Jatropha curcas]
14 Hb_000352_270 0.0916036722 - - PREDICTED: pentatricopeptide repeat-containing protein At3g26630, chloroplastic-like [Jatropha curcas]
15 Hb_001322_110 0.0938490701 - - conserved hypothetical protein [Ricinus communis]
16 Hb_028486_030 0.0944957556 - - hypothetical protein JCGZ_12706 [Jatropha curcas]
17 Hb_007389_010 0.0945838834 - - PREDICTED: THO complex subunit 7A [Jatropha curcas]
18 Hb_000853_190 0.0948485873 - - mitochondrial carrier protein, putative [Ricinus communis]
19 Hb_001268_420 0.0956229534 - - PREDICTED: uncharacterized protein LOC105630158 [Jatropha curcas]
20 Hb_029879_130 0.0959138248 - - Derlin-2, putative [Ricinus communis]

Gene co-expression network

sample Hb_000614_220 Hb_000614_220 Hb_002799_110 Hb_002799_110 Hb_000614_220--Hb_002799_110 Hb_027654_060 Hb_027654_060 Hb_000614_220--Hb_027654_060 Hb_000614_160 Hb_000614_160 Hb_000614_220--Hb_000614_160 Hb_000510_290 Hb_000510_290 Hb_000614_220--Hb_000510_290 Hb_012675_050 Hb_012675_050 Hb_000614_220--Hb_012675_050 Hb_012114_070 Hb_012114_070 Hb_000614_220--Hb_012114_070 Hb_002799_110--Hb_027654_060 Hb_002799_110--Hb_000614_160 Hb_003086_150 Hb_003086_150 Hb_002799_110--Hb_003086_150 Hb_000260_030 Hb_000260_030 Hb_002799_110--Hb_000260_030 Hb_002490_020 Hb_002490_020 Hb_002799_110--Hb_002490_020 Hb_082609_010 Hb_082609_010 Hb_027654_060--Hb_082609_010 Hb_000962_040 Hb_000962_040 Hb_027654_060--Hb_000962_040 Hb_003020_220 Hb_003020_220 Hb_027654_060--Hb_003020_220 Hb_028486_030 Hb_028486_030 Hb_027654_060--Hb_028486_030 Hb_007389_010 Hb_007389_010 Hb_000614_160--Hb_007389_010 Hb_000614_160--Hb_000260_030 Hb_005496_140 Hb_005496_140 Hb_000614_160--Hb_005496_140 Hb_012019_010 Hb_012019_010 Hb_000614_160--Hb_012019_010 Hb_002046_180 Hb_002046_180 Hb_000614_160--Hb_002046_180 Hb_000130_220 Hb_000130_220 Hb_000510_290--Hb_000130_220 Hb_001322_110 Hb_001322_110 Hb_000510_290--Hb_001322_110 Hb_000510_290--Hb_003020_220 Hb_003038_240 Hb_003038_240 Hb_000510_290--Hb_003038_240 Hb_011689_120 Hb_011689_120 Hb_000510_290--Hb_011689_120 Hb_011909_100 Hb_011909_100 Hb_012675_050--Hb_011909_100 Hb_000107_160 Hb_000107_160 Hb_012675_050--Hb_000107_160 Hb_000061_210 Hb_000061_210 Hb_012675_050--Hb_000061_210 Hb_000046_050 Hb_000046_050 Hb_012675_050--Hb_000046_050 Hb_103118_010 Hb_103118_010 Hb_012675_050--Hb_103118_010 Hb_002408_020 Hb_002408_020 Hb_012675_050--Hb_002408_020 Hb_012114_070--Hb_003038_240 Hb_018133_020 Hb_018133_020 Hb_012114_070--Hb_018133_020 Hb_000155_200 Hb_000155_200 Hb_012114_070--Hb_000155_200 Hb_012114_070--Hb_000614_160 Hb_004157_020 Hb_004157_020 Hb_012114_070--Hb_004157_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.24322 3.88574 6.30574 4.10621 3.87063 6.01175
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.10988 12.538 9.8383 3.64709 9.50638

CAGE analysis