Hb_000163_120

Information

Type -
Description -
Location Contig163: 79761-81848
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000163_120 0.0 - - -
2 Hb_003492_030 0.0306840295 - - -
3 Hb_000465_200 0.035119287 - - PREDICTED: protein NSP-INTERACTING KINASE 1 [Jatropha curcas]
4 Hb_002001_040 0.041629745 - - hypothetical protein CISIN_1g044945mg, partial [Citrus sinensis]
5 Hb_000207_410 0.0433771478 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000537_110 0.0441401332 - - -
7 Hb_003866_010 0.08389989 - - Polyprotein, putative [Solanum demissum]
8 Hb_000445_340 0.0926709389 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000053_090 0.09651364 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Populus euphratica]
10 Hb_072639_010 0.096685839 - - JHL22C18.10 [Jatropha curcas]
11 Hb_008014_080 0.0977818402 - - PREDICTED: uncharacterized protein LOC103848614 [Brassica rapa]
12 Hb_000212_340 0.0988737665 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000200_260 0.1027525192 - - PREDICTED: uncharacterized protein LOC104232531 isoform X2 [Nicotiana sylvestris]
14 Hb_001184_120 0.2452003793 - - hypothetical protein CICLE_v10025281mg [Citrus clementina]
15 Hb_001433_060 0.2479512085 - - hypothetical protein JCGZ_23291 [Jatropha curcas]
16 Hb_000680_040 0.331094341 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_002485_020 0.336525985 - - metal transport family protein [Populus trichocarpa]
18 Hb_003811_010 0.3400122265 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
19 Hb_034589_010 0.3424664834 - - hypothetical protein MIMGU_mgv1a020753mg, partial [Erythranthe guttata]
20 Hb_040948_020 0.3562234414 - - -

Gene co-expression network

sample Hb_000163_120 Hb_000163_120 Hb_003492_030 Hb_003492_030 Hb_000163_120--Hb_003492_030 Hb_000465_200 Hb_000465_200 Hb_000163_120--Hb_000465_200 Hb_002001_040 Hb_002001_040 Hb_000163_120--Hb_002001_040 Hb_000207_410 Hb_000207_410 Hb_000163_120--Hb_000207_410 Hb_000537_110 Hb_000537_110 Hb_000163_120--Hb_000537_110 Hb_003866_010 Hb_003866_010 Hb_000163_120--Hb_003866_010 Hb_003492_030--Hb_003866_010 Hb_000445_340 Hb_000445_340 Hb_003492_030--Hb_000445_340 Hb_003492_030--Hb_000465_200 Hb_000053_090 Hb_000053_090 Hb_003492_030--Hb_000053_090 Hb_072639_010 Hb_072639_010 Hb_003492_030--Hb_072639_010 Hb_000465_200--Hb_002001_040 Hb_000465_200--Hb_000207_410 Hb_000465_200--Hb_000537_110 Hb_000465_200--Hb_003866_010 Hb_002001_040--Hb_000207_410 Hb_002001_040--Hb_000537_110 Hb_002001_040--Hb_003492_030 Hb_002001_040--Hb_003866_010 Hb_000207_410--Hb_000537_110 Hb_000207_410--Hb_003492_030 Hb_000207_410--Hb_003866_010 Hb_000537_110--Hb_003492_030 Hb_000537_110--Hb_003866_010 Hb_003866_010--Hb_000445_340 Hb_003866_010--Hb_000053_090 Hb_003866_010--Hb_072639_010 Hb_008014_080 Hb_008014_080 Hb_003866_010--Hb_008014_080 Hb_000212_340 Hb_000212_340 Hb_003866_010--Hb_000212_340 Hb_000200_260 Hb_000200_260 Hb_003866_010--Hb_000200_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0481842 0 0.0962344 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis