Hb_000032_110

Information

Type -
Description -
Location Contig32: 104375-105036
Sequence    

Annotation

kegg
ID rcu:RCOM_1691400
description nadhp hc toxin reductase, putative (EC:1.1.1.219)
nr
ID XP_002509938.1
description nadhp hc toxin reductase, putative [Ricinus communis]
swissprot
ID P51110
description Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1
trembl
ID B9RCQ4
description Nadhp hc toxin reductase, putative OS=Ricinus communis GN=RCOM_1691400 PE=3 SV=1
Gene Ontology
ID GO:0003854
description anthocyanidin reductase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000032_110 0.0 - - nadhp hc toxin reductase, putative [Ricinus communis]
2 Hb_002918_100 0.0001190091 - - hypothetical protein JCGZ_21466 [Jatropha curcas]
3 Hb_023930_010 0.0018490475 - - hypothetical protein RCOM_0641040 [Ricinus communis]
4 Hb_184500_020 0.0028355652 - - -
5 Hb_053709_020 0.0029373999 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
6 Hb_001689_060 0.0041128128 - - PREDICTED: uncharacterized protein LOC103846154 [Brassica rapa]
7 Hb_000039_130 0.004897289 - - -
8 Hb_000733_140 0.0064851777 - - PREDICTED: ras-related protein Rab2BV-like [Jatropha curcas]
9 Hb_000494_140 0.0070140706 transcription factor TF Family: ERF hypothetical protein JCGZ_14625 [Jatropha curcas]
10 Hb_000125_050 0.0085723934 - - -
11 Hb_001343_070 0.0099982262 - - PREDICTED: pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like [Jatropha curcas]
12 Hb_002909_030 0.0101802373 transcription factor TF Family: C2H2 hypothetical protein RCOM_1270600 [Ricinus communis]
13 Hb_000295_150 0.0130927863 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
14 Hb_007040_020 0.013894252 - - -
15 Hb_003914_040 0.0139018088 - - hypothetical protein EUGRSUZ_H02626 [Eucalyptus grandis]
16 Hb_001545_090 0.014836405 - - PREDICTED: uncharacterized protein LOC103874823 [Brassica rapa]
17 Hb_000235_020 0.0187959072 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001973_020 0.0215119521 - - -
19 Hb_006277_040 0.0220681582 - - PREDICTED: sodium-dependent phosphate transporter 1-like [Jatropha curcas]
20 Hb_001660_110 0.02229182 - - amino acid transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000032_110 Hb_000032_110 Hb_002918_100 Hb_002918_100 Hb_000032_110--Hb_002918_100 Hb_023930_010 Hb_023930_010 Hb_000032_110--Hb_023930_010 Hb_184500_020 Hb_184500_020 Hb_000032_110--Hb_184500_020 Hb_053709_020 Hb_053709_020 Hb_000032_110--Hb_053709_020 Hb_001689_060 Hb_001689_060 Hb_000032_110--Hb_001689_060 Hb_000039_130 Hb_000039_130 Hb_000032_110--Hb_000039_130 Hb_002918_100--Hb_023930_010 Hb_002918_100--Hb_184500_020 Hb_002918_100--Hb_053709_020 Hb_002918_100--Hb_001689_060 Hb_002918_100--Hb_000039_130 Hb_023930_010--Hb_184500_020 Hb_023930_010--Hb_053709_020 Hb_023930_010--Hb_000039_130 Hb_000494_140 Hb_000494_140 Hb_023930_010--Hb_000494_140 Hb_184500_020--Hb_053709_020 Hb_184500_020--Hb_000039_130 Hb_184500_020--Hb_000494_140 Hb_053709_020--Hb_000039_130 Hb_053709_020--Hb_000494_140 Hb_000733_140 Hb_000733_140 Hb_001689_060--Hb_000733_140 Hb_001343_070 Hb_001343_070 Hb_001689_060--Hb_001343_070 Hb_001689_060--Hb_023930_010 Hb_002909_030 Hb_002909_030 Hb_001689_060--Hb_002909_030 Hb_000039_130--Hb_000494_140 Hb_000125_050 Hb_000125_050 Hb_000039_130--Hb_000125_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.119719 0.307943 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis