Gene annotation
Transcriptome id Sobic.010G020400.1
Synonym Sb10g001960, PDF1, PP2AA2, PR65
Functional annotation HEAT repeat family protein, putative, expressed
UniProt A0A194YGU2
Pfam PF13646 PF02985
Panther DB PTHR10648 PTHR10648:SF11
NCBI CDD -
KEGG Orthology K03456; serine/threonine-protein phosphatase 2A regulatory subunit A
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G25800 : protein phosphatase 2A subunit A2
RAP-DB (Rice) LOC_Os09g07510.2 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a050181 , Zm00025a041375
Brachypodium KQJ86974 , KQJ86975 , KQJ86976 , KQJ86959 , KQJ86960 , PNT62838
Barley HORVU5Hr1G051850.6 , HORVU5Hr1G051850.7 , HORVU5Hr1G051850.4 , HORVU5Hr1G051850.5 , HORVU5Hr1G051850.2 , HORVU5Hr1G051850.3 , HORVU5Hr1G051850.1 , HORVU5Hr1G051850.8
Wheat TraesCS5A02G168400 , TraesCS5B02G165200 , TraesCS5B02G165200 , TraesCS5B02G165200 , TraesCS5B02G165200 , TraesCS5D02G172700 , TraesCS5D02G172700 , TraesCS5D02G172700 , TraesCS5D02G172700 , TraesCS5D02G172700 , TraesCS5D02G172700 , TraesCS5A02G168400 , TraesCS5A02G168400 , TraesCS5A02G168400 , TraesCS5A02G168400
Populus -


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cDNA sequences
Sobic.010G020400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
2 Sobic.001G049400 OsPP2Ac-2 - Phosphatase 2A isoform 2 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
3 Sobic.003G338500 endoplasmic reticulum-Golgi intermediate compartment protein 3, putative, expressed -
4 Sobic.001G014800 tetratricopeptide repeat containing protein, putative, expressed -
5 Sobic.002G008800 PTEN, putative, expressed K01110: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN
6 Sobic.008G055900 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
7 Sobic.008G033500 nucleolar GTPase, putative, expressed -
8 Sobic.001G333100 U-box domain-containing protein, putative, expressed K10597: UBE4B, ubiquitin conjugation factor E4 B
9 Sobic.010G223300 CDP-alcohol phosphatidyltransferase, putative, expressed K00999: CDP-diacylglycerol--inositol 3-phosphatidyltransferase
10 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
11 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
12 Sobic.008G085700 exocyst complex component 5, putative, expressed -
13 Sobic.002G263600 expressed protein -
14 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
15 Sobic.003G422900 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
16 Sobic.009G192000 transcription initiation factor IIF beta subunit, putative, expressed K03139: TFIIF2, GTF2F2, transcription initiation factor TFIIF subunit beta
17 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
18 Sobic.006G136400 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed K03260: translation initiation factor 4G
19 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
20 Sobic.002G047700 CK1_CaseinKinase_1a.6 - CK1 includes the casein kinase 1 kinases, expressed -


Gene co-expression network
sample Sobic010G020400 Sobic010G020400 Sobic002G020700 Sobic002G020700 Sobic010G020400--Sobic002G020700 Sobic001G049400 Sobic001G049400 Sobic010G020400--Sobic001G049400 Sobic003G338500 Sobic003G338500 Sobic010G020400--Sobic003G338500 Sobic001G014800 Sobic001G014800 Sobic010G020400--Sobic001G014800 Sobic002G008800 Sobic002G008800 Sobic010G020400--Sobic002G008800 Sobic008G055900 Sobic008G055900 Sobic010G020400--Sobic008G055900 Sobic008G033500 Sobic008G033500 Sobic010G020400--Sobic008G033500 Sobic001G333100 Sobic001G333100 Sobic010G020400--Sobic001G333100 Sobic010G223300 Sobic010G223300 Sobic010G020400--Sobic010G223300 Sobic002G020700--Sobic010G020400 Sobic008G085700 Sobic008G085700 Sobic002G020700--Sobic008G085700 Sobic002G020700--Sobic008G055900 Sobic002G020700--Sobic001G333100 Sobic002G020700--Sobic010G223300 Sobic001G449900 Sobic001G449900 Sobic002G020700--Sobic001G449900 Sobic004G039600 Sobic004G039600 Sobic002G020700--Sobic004G039600 Sobic008G082500 Sobic008G082500 Sobic002G020700--Sobic008G082500 Sobic007G054800 Sobic007G054800 Sobic002G020700--Sobic007G054800 Sobic001G049400--Sobic010G020400 Sobic001G465400 Sobic001G465400 Sobic001G049400--Sobic001G465400 Sobic001G049400--Sobic008G085700 Sobic004G078700 Sobic004G078700 Sobic001G049400--Sobic004G078700 Sobic001G211900 Sobic001G211900 Sobic001G049400--Sobic001G211900 Sobic003G302200 Sobic003G302200 Sobic001G049400--Sobic003G302200 Sobic001G049400--Sobic008G055900 Sobic001G049400--Sobic003G338500 Sobic007G173700 Sobic007G173700 Sobic001G049400--Sobic007G173700 Sobic003G338500--Sobic010G223300 Sobic010G261600 Sobic010G261600 Sobic003G338500--Sobic010G261600 Sobic003G338500--Sobic010G020400 Sobic004G275700 Sobic004G275700 Sobic003G338500--Sobic004G275700 Sobic003G338500--Sobic008G055900 Sobic009G192000 Sobic009G192000 Sobic003G338500--Sobic009G192000 Sobic009G224000 Sobic009G224000 Sobic003G338500--Sobic009G224000 Sobic003G338500--Sobic001G049400 Sobic003G338500--Sobic002G008800 Sobic001G014800--Sobic010G020400 Sobic009G084000 Sobic009G084000 Sobic001G014800--Sobic009G084000 Sobic001G014800--Sobic008G033500 Sobic001G014800--Sobic001G333100 Sobic001G014800--Sobic009G192000 Sobic002G047700 Sobic002G047700 Sobic001G014800--Sobic002G047700 Sobic006G180000 Sobic006G180000 Sobic001G014800--Sobic006G180000 Sobic006G201800 Sobic006G201800 Sobic001G014800--Sobic006G201800 Sobic002G263600 Sobic002G263600 Sobic001G014800--Sobic002G263600 Sobic002G008800--Sobic010G261600 Sobic002G008800--Sobic010G020400 Sobic002G262900 Sobic002G262900 Sobic002G008800--Sobic002G262900 Sobic002G008800--Sobic010G223300 Sobic001G382600 Sobic001G382600 Sobic002G008800--Sobic001G382600 Sobic004G177300 Sobic004G177300 Sobic002G008800--Sobic004G177300 Sobic002G008800--Sobic004G275700 Sobic002G008800--Sobic001G333100 Sobic002G008800--Sobic008G055900 Sobic008G055900--Sobic002G020700 Sobic008G055900--Sobic010G223300 Sobic008G103300 Sobic008G103300 Sobic008G055900--Sobic008G103300 Sobic008G055900--Sobic010G020400 Sobic006G136400 Sobic006G136400 Sobic008G055900--Sobic006G136400 Sobic001G447300 Sobic001G447300 Sobic008G055900--Sobic001G447300 Sobic008G055900--Sobic008G085700 Sobic006G056200 Sobic006G056200 Sobic008G055900--Sobic006G056200 Sobic008G129600 Sobic008G129600 Sobic008G055900--Sobic008G129600 Sobic008G033500--Sobic010G020400 Sobic008G033500--Sobic001G014800 Sobic008G033500--Sobic001G333100 Sobic008G033500--Sobic002G020700 Sobic007G162100 Sobic007G162100 Sobic008G033500--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic008G033500--Sobic006G127600 Sobic003G422900 Sobic003G422900 Sobic008G033500--Sobic003G422900 Sobic009G068500 Sobic009G068500 Sobic008G033500--Sobic009G068500 Sobic001G193300 Sobic001G193300 Sobic008G033500--Sobic001G193300 Sobic003G264100 Sobic003G264100 Sobic001G333100--Sobic003G264100 Sobic001G333100--Sobic002G020700 Sobic003G221400 Sobic003G221400 Sobic001G333100--Sobic003G221400 Sobic001G192000 Sobic001G192000 Sobic001G333100--Sobic001G192000 Sobic001G333100--Sobic010G020400 Sobic002G142900 Sobic002G142900 Sobic001G333100--Sobic002G142900 Sobic001G333100--Sobic010G223300 Sobic001G251100 Sobic001G251100 Sobic001G333100--Sobic001G251100 Sobic001G333100--Sobic008G033500 Sobic010G223300--Sobic008G055900 Sobic010G223300--Sobic001G449900 Sobic010G223300--Sobic002G020700 Sobic010G223300--Sobic003G338500 Sobic006G260500 Sobic006G260500 Sobic010G223300--Sobic006G260500 Sobic004G092500 Sobic004G092500 Sobic010G223300--Sobic004G092500 Sobic010G223300--Sobic010G020400 Sobic010G223300--Sobic002G008800 Sobic010G223300--Sobic006G180000
Octagon: transcription factors


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