Gene annotation
Transcriptome id Sobic.009G042700.2,Sobic.009G042700.1
Synonym NHX2, SbNHX2, Sodium Proton Antiporter 2, ATNHX2, Sb09g003590
Functional annotation - (PubMedID : 29751546)
transporter, monovalent cation:proton antiporter-2 family, putative, expressed
UniProt B7SNI8 , A0A1B6P6G8
Pfam PF00999
Panther DB PTHR10110 PTHR10110:SF116
NCBI CDD KOG1965; Sodium/hydrogen exchanger protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G05030 : sodium hydrogen exchanger 2
RAP-DB (Rice) LOC_Os05g05590.1 : transporter, monovalent cation:proton antiporter-2 family, putative, expressed
MaizeGDB (Corn) Zm00025a055396
Brachypodium KQK14736 , KQK07518
Barley HORVU1Hr1G020360.2 , HORVU1Hr1G020360.3 , HORVU1Hr1G020360.4 , HORVU1Hr1G020360.5 , HORVU1Hr1G020360.6 , HORVU1Hr1G020360.7 , HORVU1Hr1G020360.8 , HORVU1Hr1G020360.9
Wheat TraesCS1D02G093900 , TraesCS1A02G102300 , TraesCS1B02G112700
Populus -


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cDNA sequences
Sobic.009G042700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
2 Sobic.004G002400 expressed protein -
3 Sobic.009G219000 ANTH/ENTH domain containing protein, putative, expressed -
4 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
5 Sobic.004G004300 expressed protein -
6 Sobic.001G152280 - -
7 Sobic.001G281100 START domain containing protein, expressed -
8 Sobic.001G220300 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
9 Sobic.006G052500 2-oxoglutarate dehydrogenase E1 component, mitochondrial precursor, putative, expressed K00164: OGDH, 2-oxoglutarate dehydrogenase E1 component
10 Sobic.003G331400 expressed protein -
11 Sobic.003G195500 SEY1, putative, expressed -
12 Sobic.001G193000 STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
13 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
14 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
15 Sobic.002G405900 zinc finger, RING-type, putative, expressed -
16 Sobic.001G125200 HEAT repeat family protein, putative, expressed -
17 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
18 Sobic.006G012500 protein transport protein Sec24-like, putative, expressed K14007: protein transport protein SEC24
19 Sobic.003G056100 transcription initiation factor, putative, expressed K03129: transcription initiation factor TFIID subunit 4
20 Sobic.001G534800 Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@adapitin protein, putative, expressed K11824: AP-2 complex subunit alpha


Gene co-expression network
sample Sobic009G042700 Sobic009G042700 Sobic010G053800 Sobic010G053800 Sobic009G042700--Sobic010G053800 Sobic004G002400 Sobic004G002400 Sobic009G042700--Sobic004G002400 Sobic009G219000 Sobic009G219000 Sobic009G042700--Sobic009G219000 Sobic001G466700 Sobic001G466700 Sobic009G042700--Sobic001G466700 Sobic004G004300 Sobic004G004300 Sobic009G042700--Sobic004G004300 Sobic001G152280 Sobic001G152280 Sobic009G042700--Sobic001G152280 Sobic001G281100 Sobic001G281100 Sobic009G042700--Sobic001G281100 Sobic001G220300 Sobic001G220300 Sobic009G042700--Sobic001G220300 Sobic006G052500 Sobic006G052500 Sobic009G042700--Sobic006G052500 Sobic006G012500 Sobic006G012500 Sobic010G053800--Sobic006G012500 Sobic010G275500 Sobic010G275500 Sobic010G053800--Sobic010G275500 Sobic004G072100 Sobic004G072100 Sobic010G053800--Sobic004G072100 Sobic001G155000 Sobic001G155000 Sobic010G053800--Sobic001G155000 Sobic003G187500 Sobic003G187500 Sobic010G053800--Sobic003G187500 Sobic008G047800 Sobic008G047800 Sobic010G053800--Sobic008G047800 Sobic010G116600 Sobic010G116600 Sobic010G053800--Sobic010G116600 Sobic006G163800 Sobic006G163800 Sobic010G053800--Sobic006G163800 Sobic004G039600 Sobic004G039600 Sobic010G053800--Sobic004G039600 Sobic004G002400--Sobic001G281100 Sobic004G002400--Sobic004G039600 Sobic004G002400--Sobic003G187500 Sobic007G132100 Sobic007G132100 Sobic004G002400--Sobic007G132100 Sobic006G126100 Sobic006G126100 Sobic004G002400--Sobic006G126100 Sobic001G124200 Sobic001G124200 Sobic004G002400--Sobic001G124200 Sobic004G002400--Sobic001G466700 Sobic009G249200 Sobic009G249200 Sobic004G002400--Sobic009G249200 Sobic001G534800 Sobic001G534800 Sobic004G002400--Sobic001G534800 Sobic001G541100 Sobic001G541100 Sobic009G219000--Sobic001G541100 Sobic001G323000 Sobic001G323000 Sobic009G219000--Sobic001G323000 Sobic001G261456 Sobic001G261456 Sobic009G219000--Sobic001G261456 Sobic008G046500 Sobic008G046500 Sobic009G219000--Sobic008G046500 Sobic009G219000--Sobic001G466700 Sobic004G274400 Sobic004G274400 Sobic009G219000--Sobic004G274400 Sobic009G138100 Sobic009G138100 Sobic009G219000--Sobic009G138100 Sobic001G105500 Sobic001G105500 Sobic009G219000--Sobic001G105500 Sobic001G371200 Sobic001G371200 Sobic009G219000--Sobic001G371200 Sobic006G252700 Sobic006G252700 Sobic001G466700--Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic001G466700--Sobic003G081000 Sobic001G143500 Sobic001G143500 Sobic001G466700--Sobic001G143500 Sobic002G388200 Sobic002G388200 Sobic001G466700--Sobic002G388200 Sobic001G466700--Sobic001G371200 Sobic004G021100 Sobic004G021100 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic009G056800 Sobic009G056800 Sobic001G466700--Sobic009G056800 Sobic007G118200 Sobic007G118200 Sobic001G466700--Sobic007G118200 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic001G415300 Sobic001G415300 Sobic004G004300--Sobic001G415300 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic001G152280--Sobic001G220300 Sobic001G152280--Sobic009G042700 Sobic001G152280--Sobic010G053800 Sobic010G101800 Sobic010G101800 Sobic001G152280--Sobic010G101800 Sobic007G207000 Sobic007G207000 Sobic001G152280--Sobic007G207000 Sobic003G278500 Sobic003G278500 Sobic001G152280--Sobic003G278500 Sobic007G186900 Sobic007G186900 Sobic001G152280--Sobic007G186900 Sobic002G315200 Sobic002G315200 Sobic001G152280--Sobic002G315200 Sobic001G152280--Sobic001G155000 Sobic001G281100--Sobic001G534800 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500 Sobic004G146500 Sobic004G146500 Sobic001G220300--Sobic004G146500 Sobic001G220300--Sobic008G047800 Sobic001G220300--Sobic002G315200 Sobic001G220300--Sobic010G101800 Sobic001G109800 Sobic001G109800 Sobic001G220300--Sobic001G109800 Sobic009G191000 Sobic009G191000 Sobic001G220300--Sobic009G191000 Sobic004G065100 Sobic004G065100 Sobic001G220300--Sobic004G065100 Sobic004G274200 Sobic004G274200 Sobic001G220300--Sobic004G274200 Sobic002G297200 Sobic002G297200 Sobic001G220300--Sobic002G297200 Sobic002G310200 Sobic002G310200 Sobic006G052500--Sobic002G310200 Sobic006G052500--Sobic009G219000 Sobic006G052500--Sobic009G042700 Sobic002G067600 Sobic002G067600 Sobic006G052500--Sobic002G067600 Sobic007G203500 Sobic007G203500 Sobic006G052500--Sobic007G203500 Sobic006G052800 Sobic006G052800 Sobic006G052500--Sobic006G052800 Sobic006G052500--Sobic010G053800 Sobic007G134600 Sobic007G134600 Sobic006G052500--Sobic007G134600 Sobic010G056000 Sobic010G056000 Sobic006G052500--Sobic010G056000
Octagon: transcription factors


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