Gene annotation
Transcriptome id Sobic.008G035900.1
Synonym Sb08g003100
Functional annotation calmodulin-binding protein, putative, expressed
UniProt C5YRR1
Pfam -
Panther DB PTHR31250 PTHR31250:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52870 : IQ calmodulin-binding motif family protein
RAP-DB (Rice) LOC_Os12g05420.1 : calmodulin-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a013018 , Zm00025a033480 , Zm00025a040455
Brachypodium KQJ92263
Barley HORVU5Hr1G041930.8 , HORVU5Hr1G041930.1 , HORVU5Hr1G041930.2 , HORVU5Hr1G041930.3 , HORVU5Hr1G041930.5 , HORVU5Hr1G041930.6 , HORVU5Hr1G041930.13 , HORVU5Hr1G041930.10 , HORVU5Hr1G041930.11 , HORVU5Hr1G041930.15 , HORVU5Hr1G041930.18 , HORVU5Hr1G041930.19 , HORVU5Hr1G041930.12 , HORVU6Hr1G019510.4 , HORVU6Hr1G019510.5 , HORVU6Hr1G019510.6 , HORVU6Hr1G019510.7 , HORVU6Hr1G019510.1 , HORVU6Hr1G019510.2 , HORVU6Hr1G019510.3 , HORVU5Hr1G041930.16 , HORVU6Hr1G019510.8 , HORVU6Hr1G019510.9 , HORVU5Hr1G041930.17 , HORVU6Hr1G019510.12 , HORVU6Hr1G019510.13 , HORVU6Hr1G019510.10 , HORVU6Hr1G019510.11 , HORVU5Hr1G041930.23 , HORVU5Hr1G041930.22 , HORVU5Hr1G041930.21 , HORVU5Hr1G041930.20 , HORVU5Hr1G041930.26 , HORVU5Hr1G041930.25 , HORVU5Hr1G041930.24
Wheat TraesCS6D02G097300 , TraesCS6A02G104600 , TraesCS5D02G137100 , TraesCS5B02G128200 , TraesCS6B02G137500 , TraesCS6B02G137500 , TraesCS6B02G133900 , TraesCS6D02G093400 , TraesCS5A02G129600 , TraesCS6A02G108900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G003700 ABIL2, putative, expressed -
2 Sobic.007G009000 expressed protein -
3 Sobic.002G357800 SHR, putative, expressed -
4 Sobic.004G287800 expressed protein -
5 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
6 Sobic.008G157000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.001G528600 remorin family protein, putative, expressed -
8 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
9 Sobic.004G331200 expressed protein -
10 Sobic.009G021700 expressed protein -
11 Sobic.001G030400 protein kinase family protein, putative, expressed -
12 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
13 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
14 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
15 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
16 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
17 Sobic.004G152200 glycosyltransferase, putative, expressed -
18 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
19 Sobic.006G262600 expressed protein -
20 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22


Gene co-expression network
sample Sobic008G035900 Sobic008G035900 Sobic003G003700 Sobic003G003700 Sobic008G035900--Sobic003G003700 Sobic007G009000 Sobic007G009000 Sobic008G035900--Sobic007G009000 Sobic002G357800 Sobic002G357800 Sobic008G035900--Sobic002G357800 Sobic004G287800 Sobic004G287800 Sobic008G035900--Sobic004G287800 Sobic003G247600 Sobic003G247600 Sobic008G035900--Sobic003G247600 Sobic008G157000 Sobic008G157000 Sobic008G035900--Sobic008G157000 Sobic001G528600 Sobic001G528600 Sobic008G035900--Sobic001G528600 Sobic001G107200 Sobic001G107200 Sobic008G035900--Sobic001G107200 Sobic004G331200 Sobic004G331200 Sobic008G035900--Sobic004G331200 Sobic001G468500 Sobic001G468500 Sobic003G003700--Sobic001G468500 Sobic003G420100 Sobic003G420100 Sobic003G003700--Sobic003G420100 Sobic008G143000 Sobic008G143000 Sobic003G003700--Sobic008G143000 Sobic009G242501 Sobic009G242501 Sobic003G003700--Sobic009G242501 Sobic003G003700--Sobic003G247600 Sobic003G003700--Sobic001G528600 Sobic003G003700--Sobic008G035900 Sobic003G003700--Sobic008G157000 Sobic004G286700 Sobic004G286700 Sobic003G003700--Sobic004G286700 Sobic007G009000--Sobic008G035900 Sobic001G230900 Sobic001G230900 Sobic007G009000--Sobic001G230900 Sobic001G030400 Sobic001G030400 Sobic007G009000--Sobic001G030400 Sobic007G009000--Sobic003G003700 Sobic001G157800 Sobic001G157800 Sobic007G009000--Sobic001G157800 Sobic003G024800 Sobic003G024800 Sobic007G009000--Sobic003G024800 Sobic004G134100 Sobic004G134100 Sobic007G009000--Sobic004G134100 Sobic001G402600 Sobic001G402600 Sobic007G009000--Sobic001G402600 Sobic001G445000 Sobic001G445000 Sobic007G009000--Sobic001G445000 Sobic007G154200 Sobic007G154200 Sobic002G357800--Sobic007G154200 Sobic006G003100 Sobic006G003100 Sobic002G357800--Sobic006G003100 Sobic003G020200 Sobic003G020200 Sobic002G357800--Sobic003G020200 Sobic003G236600 Sobic003G236600 Sobic002G357800--Sobic003G236600 Sobic001G455100 Sobic001G455100 Sobic002G357800--Sobic001G455100 Sobic006G201000 Sobic006G201000 Sobic002G357800--Sobic006G201000 Sobic001G314000 Sobic001G314000 Sobic002G357800--Sobic001G314000 Sobic009G074500 Sobic009G074500 Sobic002G357800--Sobic009G074500 Sobic002G357800--Sobic008G157000 Sobic004G308100 Sobic004G308100 Sobic004G287800--Sobic004G308100 Sobic007G132900 Sobic007G132900 Sobic004G287800--Sobic007G132900 Sobic002G007200 Sobic002G007200 Sobic004G287800--Sobic002G007200 Sobic004G287800--Sobic008G035900 Sobic006G254500 Sobic006G254500 Sobic004G287800--Sobic006G254500 Sobic002G353200 Sobic002G353200 Sobic004G287800--Sobic002G353200 Sobic009G123500 Sobic009G123500 Sobic004G287800--Sobic009G123500 Sobic009G064900 Sobic009G064900 Sobic004G287800--Sobic009G064900 Sobic004G287800--Sobic004G331200 Sobic005G047100 Sobic005G047100 Sobic003G247600--Sobic005G047100 Sobic003G247600--Sobic003G420100 Sobic004G066900 Sobic004G066900 Sobic003G247600--Sobic004G066900 Sobic007G208100 Sobic007G208100 Sobic003G247600--Sobic007G208100 Sobic008G141200 Sobic008G141200 Sobic003G247600--Sobic008G141200 Sobic003G135400 Sobic003G135400 Sobic003G247600--Sobic003G135400 Sobic003G052900 Sobic003G052900 Sobic003G247600--Sobic003G052900 Sobic003G345700 Sobic003G345700 Sobic003G247600--Sobic003G345700 Sobic006G119000 Sobic006G119000 Sobic003G247600--Sobic006G119000 Sobic008G157000--Sobic002G357800 Sobic008G157000--Sobic003G236600 Sobic001G250100 Sobic001G250100 Sobic008G157000--Sobic001G250100 Sobic004G165300 Sobic004G165300 Sobic008G157000--Sobic004G165300 Sobic008G157000--Sobic003G003700 Sobic003G426200 Sobic003G426200 Sobic008G157000--Sobic003G426200 Sobic001G112800 Sobic001G112800 Sobic008G157000--Sobic001G112800 Sobic010G218300 Sobic010G218300 Sobic008G157000--Sobic010G218300 Sobic002G094600 Sobic002G094600 Sobic008G157000--Sobic002G094600 Sobic001G078600 Sobic001G078600 Sobic001G528600--Sobic001G078600 Sobic001G528600--Sobic001G107200 Sobic002G280700 Sobic002G280700 Sobic001G528600--Sobic002G280700 Sobic004G152200 Sobic004G152200 Sobic001G528600--Sobic004G152200 Sobic006G191700 Sobic006G191700 Sobic001G528600--Sobic006G191700 Sobic010G274000 Sobic010G274000 Sobic001G528600--Sobic010G274000 Sobic001G528600--Sobic004G331200 Sobic001G528600--Sobic005G047100 Sobic006G102900 Sobic006G102900 Sobic001G528600--Sobic006G102900 Sobic001G107200--Sobic001G528600 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic001G289900 Sobic001G289900 Sobic004G331200--Sobic001G289900 Sobic010G105400 Sobic010G105400 Sobic004G331200--Sobic010G105400 Sobic004G331200--Sobic001G078600 Sobic004G331200--Sobic001G528600 Sobic004G331200--Sobic006G191700 Sobic004G331200--Sobic001G468500 Sobic003G444300 Sobic003G444300 Sobic004G331200--Sobic003G444300 Sobic001G255600 Sobic001G255600 Sobic004G331200--Sobic001G255600 Sobic008G096200 Sobic008G096200 Sobic004G331200--Sobic008G096200
Octagon: transcription factors


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