Gene annotation
| Transcriptome id | Sobic.003G247600.1 |
|---|---|
| Synonym | Sb03g030400 |
| Functional annotation | serine/threonine-protein kinase, putative, expressed |
| UniProt | C5XFY1 |
| Pfam | PF00069 |
| Panther DB | PTHR27001 PTHR27001:SF184 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT2G42960 : Protein kinase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g47470.1 : serine/threonine-protein kinase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a028143 , Zm00025a038742 |
| Brachypodium | KQK09070 |
| Barley | HORVU3Hr1G060310.9 , HORVU3Hr1G060310.8 , HORVU3Hr1G060310.7 , HORVU3Hr1G060310.6 , HORVU3Hr1G060310.5 , HORVU3Hr1G060310.4 , HORVU3Hr1G060310.3 , HORVU3Hr1G060310.2 , HORVU3Hr1G060310.1 , HORVU3Hr1G060310.15 , HORVU3Hr1G060310.14 , HORVU3Hr1G060310.13 , HORVU3Hr1G060310.12 , HORVU3Hr1G060310.11 , HORVU3Hr1G060310.10 |
| Wheat | TraesCS3B02G269900 , TraesCS3D02G241900 , TraesCS3A02G241700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G047100 | actin, putative, expressed | K10355: actin, other eukaryote |
| 2 | Sobic.003G420100 | RNA recognition motif containing protein, putative, expressed | K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor |
| 3 | Sobic.004G066900 | protein kinase family protein, putative, expressed | - |
| 4 | Sobic.007G208100 | heavy metal-associated domain containing protein, expressed | - |
| 5 | Sobic.008G141200 | DUF1336 domain containing protein, expressed | - |
| 6 | Sobic.003G135400 | tubulin/FtsZ domain containing protein, putative, expressed | K07375: tubulin beta |
| 7 | Sobic.003G052900 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed | - |
| 8 | Sobic.003G345700 | OsSCP5 - Putative Serine Carboxypeptidase homologue, expressed | K16297: serine carboxypeptidase-like clade II |
| 9 | Sobic.006G119000 | X8 domain containing protein, expressed | - |
| 10 | Sobic.003G115200 | expressed protein | - |
| 11 | Sobic.003G269100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed | - |
| 12 | Sobic.001G528600 | remorin family protein, putative, expressed | - |
| 13 | Sobic.003G003700 | ABIL2, putative, expressed | - |
| 14 | Sobic.008G113900 | AGAP002737-PA, putative, expressed | - |
| 15 | Sobic.005G052500 | "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed | K13946: AUX1, auxin influx carrier (AUX1 LAX family) |
| 16 | Sobic.002G226500 | "SG1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659856)@expressed protein | - |
| 17 | Sobic.004G170800 | serine-aspartate repeat-containing protein I precursor, putative, expressed | - |
| 18 | Sobic.010G131400 | rho GDP-dissociation inhibitor 1, putative, expressed | K12462: ARHGDI, Rho GDP-dissociation inhibitor |
| 19 | Sobic.001G038300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed | - |
| 20 | Sobic.010G216600 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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