Gene annotation
Transcriptome id Sobic.006G157800.1
Synonym GATL3, Sb06g023460
Functional annotation glycosyl transferase 8 domain containing protein, putative, expressed
UniProt C5YCL5
Pfam PF01501
Panther DB PTHR13778 PTHR13778:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G06260 : galacturonosyltransferase-like 4
RAP-DB (Rice) LOC_Os04g44850.1 : glycosyl transferase 8 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a002567 , Zm00025a056572 , Zm00025a010455
Brachypodium PNT77551 , KQK21598 , KQJ83757
Barley HORVU4Hr1G003590.1 , HORVU4Hr1G003590.2 , HORVU2Hr1G091280.1 , HORVU2Hr1G091280.2 , HORVU4Hr1G042240.2 , HORVU4Hr1G042240.1 , HORVU0Hr1G005260.1 , HORVU2Hr1G024740.1 , HORVU2Hr1G024740.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G207700 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
2 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
3 Sobic.002G396200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
4 Sobic.003G148400 Pectinesterase 1 (Precursor)(PubMedID : 26186930)@pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.007G222600 fasciclin domain containing protein, expressed -
6 Sobic.003G223100 polygalacturonase, putative, expressed -
7 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
8 Sobic.001G247000 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.001G312700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@selenium-binding protein-like, putative, expressed -
10 Sobic.003G282600 glycosyl transferase 8 domain containing protein, putative, expressed -
11 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
12 Sobic.009G010900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed -
13 Sobic.002G285450 - -
14 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
15 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -
16 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
17 Sobic.006G178800 DUF630/DUF632 domains containing protein, putative, expressed -
18 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
19 Sobic.001G397900 "Controlling grain color, orthologous to the maize p1"(PubMedID : 20585750)@"induction of chs, chi, dfr, f3'h 3-deoxyanthocyanidins biosynthesis responsive genes "(PubMedID : 25647576)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -


Gene co-expression network
sample Sobic006G157800 Sobic006G157800 Sobic010G207700 Sobic010G207700 Sobic006G157800--Sobic010G207700 Sobic009G151100 Sobic009G151100 Sobic006G157800--Sobic009G151100 Sobic002G396200 Sobic002G396200 Sobic006G157800--Sobic002G396200 Sobic003G148400 Sobic003G148400 Sobic006G157800--Sobic003G148400 Sobic007G222600 Sobic007G222600 Sobic006G157800--Sobic007G222600 Sobic003G223100 Sobic003G223100 Sobic006G157800--Sobic003G223100 Sobic009G216300 Sobic009G216300 Sobic006G157800--Sobic009G216300 Sobic001G247000 Sobic001G247000 Sobic006G157800--Sobic001G247000 Sobic001G312700 Sobic001G312700 Sobic006G157800--Sobic001G312700 Sobic010G207700--Sobic006G157800 Sobic003G202300 Sobic003G202300 Sobic010G207700--Sobic003G202300 Sobic006G178800 Sobic006G178800 Sobic010G207700--Sobic006G178800 Sobic002G285450 Sobic002G285450 Sobic010G207700--Sobic002G285450 Sobic009G055900 Sobic009G055900 Sobic010G207700--Sobic009G055900 Sobic010G143300 Sobic010G143300 Sobic010G207700--Sobic010G143300 Sobic010G207700--Sobic002G396200 Sobic010G207700--Sobic007G222600 Sobic008G143600 Sobic008G143600 Sobic010G207700--Sobic008G143600 Sobic003G365800 Sobic003G365800 Sobic009G151100--Sobic003G365800 Sobic010G156100 Sobic010G156100 Sobic009G151100--Sobic010G156100 Sobic003G283400 Sobic003G283400 Sobic009G151100--Sobic003G283400 Sobic003G308100 Sobic003G308100 Sobic009G151100--Sobic003G308100 Sobic009G151100--Sobic009G216300 Sobic002G428000 Sobic002G428000 Sobic009G151100--Sobic002G428000 Sobic004G000700 Sobic004G000700 Sobic009G151100--Sobic004G000700 Sobic003G078300 Sobic003G078300 Sobic009G151100--Sobic003G078300 Sobic008G075200 Sobic008G075200 Sobic009G151100--Sobic008G075200 Sobic002G396200--Sobic006G178800 Sobic002G396200--Sobic006G157800 Sobic002G396200--Sobic010G207700 Sobic002G396200--Sobic009G055900 Sobic004G243400 Sobic004G243400 Sobic002G396200--Sobic004G243400 Sobic009G010900 Sobic009G010900 Sobic002G396200--Sobic009G010900 Sobic002G396200--Sobic003G223100 Sobic009G157000 Sobic009G157000 Sobic002G396200--Sobic009G157000 Sobic003G333000 Sobic003G333000 Sobic002G396200--Sobic003G333000 Sobic001G379100 Sobic001G379100 Sobic003G148400--Sobic001G379100 Sobic003G250000 Sobic003G250000 Sobic003G148400--Sobic003G250000 Sobic004G253500 Sobic004G253500 Sobic003G148400--Sobic004G253500 Sobic001G164500 Sobic001G164500 Sobic003G148400--Sobic001G164500 Sobic010G096200 Sobic010G096200 Sobic003G148400--Sobic010G096200 Sobic002G225000 Sobic002G225000 Sobic003G148400--Sobic002G225000 Sobic003G259500 Sobic003G259500 Sobic003G148400--Sobic003G259500 Sobic009G002900 Sobic009G002900 Sobic003G148400--Sobic009G002900 Sobic003G148400--Sobic008G075200 Sobic007G222600--Sobic009G010900 Sobic001G127700 Sobic001G127700 Sobic007G222600--Sobic001G127700 Sobic006G238100 Sobic006G238100 Sobic007G222600--Sobic006G238100 Sobic007G170800 Sobic007G170800 Sobic007G222600--Sobic007G170800 Sobic003G114200 Sobic003G114200 Sobic007G222600--Sobic003G114200 Sobic007G127600 Sobic007G127600 Sobic007G222600--Sobic007G127600 Sobic004G060700 Sobic004G060700 Sobic007G222600--Sobic004G060700 Sobic001G541300 Sobic001G541300 Sobic007G222600--Sobic001G541300 Sobic006G172700 Sobic006G172700 Sobic007G222600--Sobic006G172700 Sobic003G223100--Sobic008G075200 Sobic002G377300 Sobic002G377300 Sobic003G223100--Sobic002G377300 Sobic001G047200 Sobic001G047200 Sobic003G223100--Sobic001G047200 Sobic003G223100--Sobic009G055900 Sobic008G181400 Sobic008G181400 Sobic003G223100--Sobic008G181400 Sobic004G319800 Sobic004G319800 Sobic003G223100--Sobic004G319800 Sobic003G291000 Sobic003G291000 Sobic003G223100--Sobic003G291000 Sobic003G030700 Sobic003G030700 Sobic003G223100--Sobic003G030700 Sobic003G223100--Sobic003G148400 Sobic002G142500 Sobic002G142500 Sobic009G216300--Sobic002G142500 Sobic001G518000 Sobic001G518000 Sobic009G216300--Sobic001G518000 Sobic009G128800 Sobic009G128800 Sobic009G216300--Sobic009G128800 Sobic009G235700 Sobic009G235700 Sobic009G216300--Sobic009G235700 Sobic010G165100 Sobic010G165100 Sobic009G216300--Sobic010G165100 Sobic009G216300--Sobic009G151100 Sobic010G211800 Sobic010G211800 Sobic009G216300--Sobic010G211800 Sobic001G522300 Sobic001G522300 Sobic009G216300--Sobic001G522300 Sobic002G045200 Sobic002G045200 Sobic009G216300--Sobic002G045200 Sobic002G340350 Sobic002G340350 Sobic001G247000--Sobic002G340350 Sobic006G163650 Sobic006G163650 Sobic001G247000--Sobic006G163650 Sobic006G108000 Sobic006G108000 Sobic001G247000--Sobic006G108000 Sobic007G211400 Sobic007G211400 Sobic001G247000--Sobic007G211400 Sobic004G059100 Sobic004G059100 Sobic001G247000--Sobic004G059100 Sobic009G163700 Sobic009G163700 Sobic001G247000--Sobic009G163700 Sobic003G282600 Sobic003G282600 Sobic001G247000--Sobic003G282600 Sobic003G377200 Sobic003G377200 Sobic001G247000--Sobic003G377200 Sobic003G040100 Sobic003G040100 Sobic001G247000--Sobic003G040100 Sobic007G130000 Sobic007G130000 Sobic001G312700--Sobic007G130000 Sobic001G267500 Sobic001G267500 Sobic001G312700--Sobic001G267500 Sobic001G312700--Sobic003G377200 Sobic001G312700--Sobic006G157800 Sobic001G072900 Sobic001G072900 Sobic001G312700--Sobic001G072900 Sobic008G020500 Sobic008G020500 Sobic001G312700--Sobic008G020500 Sobic004G043200 Sobic004G043200 Sobic001G312700--Sobic004G043200 Sobic001G312700--Sobic006G163650 Sobic002G264900 Sobic002G264900 Sobic001G312700--Sobic002G264900
Octagon: transcription factors


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