Gene annotation
Transcriptome id Sobic.006G031100.1
Synonym Sb06g003180
Functional annotation CAP (Cysteine-rich secretory proteins( (PubMedID : 26759170,(PubMedID : 24597475)
SCP-like extracellular protein, expressed
UniProt C5YD82
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF206
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19690 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os04g22210.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a011911
Brachypodium KQJ91648
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
2 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
3 Sobic.006G196400 U-box, putative, expressed -
4 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
5 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
6 Sobic.005G182800 NB-ARC domain containing protein, expressed -
7 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
8 Sobic.004G322000 hypro1, putative, expressed -
9 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
10 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
12 Sobic.003G441601 - -
13 Sobic.003G240400 leaf senescence related protein, putative, expressed -
14 Sobic.002G115600 membrane protein, putative, expressed -
15 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
16 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
17 Sobic.010G152500 glycosyltransferase, putative, expressed -
18 Sobic.005G175900 expressed protein -
19 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic006G031100 Sobic006G031100 Sobic007G090600 Sobic007G090600 Sobic006G031100--Sobic007G090600 Sobic003G215300 Sobic003G215300 Sobic006G031100--Sobic003G215300 Sobic006G196400 Sobic006G196400 Sobic006G031100--Sobic006G196400 Sobic002G029600 Sobic002G029600 Sobic006G031100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic006G031100--Sobic004G014600 Sobic005G182800 Sobic005G182800 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic004G322000 Sobic004G322000 Sobic006G031100--Sobic004G322000 Sobic006G205700 Sobic006G205700 Sobic006G031100--Sobic006G205700 Sobic007G090600--Sobic006G031100 Sobic003G282300 Sobic003G282300 Sobic007G090600--Sobic003G282300 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic007G090600--Sobic006G205700 Sobic003G240400 Sobic003G240400 Sobic007G090600--Sobic003G240400 Sobic002G115600 Sobic002G115600 Sobic007G090600--Sobic002G115600 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic003G215300--Sobic002G115600 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic006G196400--Sobic006G031100 Sobic006G196400--Sobic007G090600 Sobic005G080600 Sobic005G080600 Sobic006G196400--Sobic005G080600 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic006G196400--Sobic002G115600 Sobic005G175900 Sobic005G175900 Sobic006G196400--Sobic005G175900 Sobic010G082000 Sobic010G082000 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700 Sobic003G079100 Sobic003G079100 Sobic002G029600--Sobic003G079100 Sobic002G029600--Sobic006G031100 Sobic002G029600--Sobic003G215300 Sobic002G029600--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic002G029600--Sobic005G065700 Sobic010G152500 Sobic010G152500 Sobic002G029600--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic002G029600--Sobic005G071900 Sobic002G029600--Sobic007G090600 Sobic001G506600 Sobic001G506600 Sobic002G029600--Sobic001G506600 Sobic003G441601 Sobic003G441601 Sobic004G014600--Sobic003G441601 Sobic004G014600--Sobic007G090600 Sobic009G165100 Sobic009G165100 Sobic004G014600--Sobic009G165100 Sobic004G014600--Sobic005G182800 Sobic004G014600--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic004G014600--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic004G014600--Sobic005G182900 Sobic004G014600--Sobic006G031100 Sobic002G289500 Sobic002G289500 Sobic004G014600--Sobic002G289500 Sobic005G182800--Sobic005G182900 Sobic005G182800--Sobic004G014600 Sobic005G182800--Sobic003G079100 Sobic008G138900 Sobic008G138900 Sobic005G182800--Sobic008G138900 Sobic005G182800--Sobic006G031100 Sobic002G019000 Sobic002G019000 Sobic005G182800--Sobic002G019000 Sobic005G216600 Sobic005G216600 Sobic005G182800--Sobic005G216600 Sobic004G009200 Sobic004G009200 Sobic005G182800--Sobic004G009200 Sobic005G182800--Sobic005G065700 Sobic006G085700--Sobic003G282300 Sobic006G085700--Sobic006G031100 Sobic006G085700--Sobic007G090600 Sobic002G146000 Sobic002G146000 Sobic006G085700--Sobic002G146000 Sobic006G085700--Sobic004G014600 Sobic003G140200 Sobic003G140200 Sobic006G085700--Sobic003G140200 Sobic003G441800 Sobic003G441800 Sobic006G085700--Sobic003G441800 Sobic006G085700--Sobic005G182800 Sobic006G085700--Sobic010G152500 Sobic004G322000--Sobic007G090600 Sobic004G322000--Sobic003G215300 Sobic004G322000--Sobic006G031100 Sobic004G322000--Sobic003G140200 Sobic004G322000--Sobic003G282300 Sobic004G322000--Sobic003G240400 Sobic008G035800 Sobic008G035800 Sobic004G322000--Sobic008G035800 Sobic004G322000--Sobic010G082000 Sobic004G322000--Sobic004G014600 Sobic002G391400 Sobic002G391400 Sobic006G205700--Sobic002G391400 Sobic006G205700--Sobic003G441800 Sobic004G106100 Sobic004G106100 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic006G205700--Sobic010G241900 Sobic005G046400 Sobic005G046400 Sobic006G205700--Sobic005G046400 Sobic007G206800 Sobic007G206800 Sobic006G205700--Sobic007G206800 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100
Octagon: transcription factors


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