Gene annotation
Transcriptome id Sobic.002G029600.2,Sobic.002G029600.1
Synonym Sb02g002640
Functional annotation CBS domain containing membrane protein, putative, expressed
UniProt C5X9F2 , A0A1W0W243
Pfam PF00478 PF01070
Panther DB PTHR11911 PTHR11911:SF6
NCBI CDD KOG2550; IMP dehydrogenase/GMP reductase
KEGG Orthology K00088; IMPDH, IMP dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0006164purine nucleotide biosynthetic process GO:0003938IMP dehydrogenase activity GO:0003824catalytic activity GO:0006164purine nucleotide biosynthetic process GO:0003938IMP dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT1G16350 : Aldolase-type TIM barrel family protein
RAP-DB (Rice) LOC_Os03g56800.1 : CBS domain containing membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a008164 , Zm00025a008432
Brachypodium KQK12909 , PNT64681
Barley HORVU5Hr1G100910.2 , HORVU5Hr1G100910.1
Wheat TraesCS5D02G424000 , TraesCS5A02G416300 , TraesCS5B02G418600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
2 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
3 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
4 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
5 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.010G152500 glycosyltransferase, putative, expressed -
7 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
8 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
9 Sobic.001G506600 exostosin family domain containing protein, expressed -
10 Sobic.005G182800 NB-ARC domain containing protein, expressed -
11 Sobic.006G108300 expressed protein -
12 Sobic.007G020700 ACT domain containing protein, expressed -
13 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
14 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
15 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
16 Sobic.002G115600 membrane protein, putative, expressed -
17 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
18 Sobic.006G196400 U-box, putative, expressed -
19 Sobic.003G382200 methyltransferase domain containing protein, expressed -
20 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase


Gene co-expression network
sample Sobic002G029600 Sobic002G029600 Sobic003G079100 Sobic003G079100 Sobic002G029600--Sobic003G079100 Sobic006G031100 Sobic006G031100 Sobic002G029600--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic002G029600--Sobic003G215300 Sobic004G014600 Sobic004G014600 Sobic002G029600--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic002G029600--Sobic005G065700 Sobic010G152500 Sobic010G152500 Sobic002G029600--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic002G029600--Sobic005G071900 Sobic007G090600 Sobic007G090600 Sobic002G029600--Sobic007G090600 Sobic001G506600 Sobic001G506600 Sobic002G029600--Sobic001G506600 Sobic003G079100--Sobic002G029600 Sobic003G079100--Sobic004G014600 Sobic003G079100--Sobic005G065700 Sobic002G029500 Sobic002G029500 Sobic003G079100--Sobic002G029500 Sobic005G182800 Sobic005G182800 Sobic003G079100--Sobic005G182800 Sobic010G213600 Sobic010G213600 Sobic003G079100--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic003G079100--Sobic005G182900 Sobic003G079100--Sobic010G152500 Sobic003G079100--Sobic005G071900 Sobic006G031100--Sobic007G090600 Sobic006G031100--Sobic003G215300 Sobic006G196400 Sobic006G196400 Sobic006G031100--Sobic006G196400 Sobic006G031100--Sobic002G029600 Sobic006G031100--Sobic004G014600 Sobic006G031100--Sobic005G182800 Sobic006G085700 Sobic006G085700 Sobic006G031100--Sobic006G085700 Sobic004G322000 Sobic004G322000 Sobic006G031100--Sobic004G322000 Sobic006G205700 Sobic006G205700 Sobic006G031100--Sobic006G205700 Sobic003G215300--Sobic007G090600 Sobic003G215300--Sobic006G031100 Sobic002G115600 Sobic002G115600 Sobic003G215300--Sobic002G115600 Sobic003G240400 Sobic003G240400 Sobic003G215300--Sobic003G240400 Sobic003G215300--Sobic006G196400 Sobic001G263300 Sobic001G263300 Sobic003G215300--Sobic001G263300 Sobic007G073000 Sobic007G073000 Sobic003G215300--Sobic007G073000 Sobic001G503000 Sobic001G503000 Sobic003G215300--Sobic001G503000 Sobic003G215300--Sobic002G029600 Sobic003G441601 Sobic003G441601 Sobic004G014600--Sobic003G441601 Sobic004G014600--Sobic007G090600 Sobic009G165100 Sobic009G165100 Sobic004G014600--Sobic009G165100 Sobic004G014600--Sobic005G182800 Sobic004G014600--Sobic003G079100 Sobic004G014600--Sobic010G213600 Sobic004G014600--Sobic005G182900 Sobic004G014600--Sobic006G031100 Sobic002G289500 Sobic002G289500 Sobic004G014600--Sobic002G289500 Sobic002G019000 Sobic002G019000 Sobic005G065700--Sobic002G019000 Sobic005G065700--Sobic005G071900 Sobic005G065700--Sobic005G182900 Sobic005G066500 Sobic005G066500 Sobic005G065700--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G065700--Sobic005G110511 Sobic005G065700--Sobic010G213600 Sobic005G065700--Sobic003G079100 Sobic008G033100 Sobic008G033100 Sobic005G065700--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic005G065700--Sobic010G242800 Sobic003G382200 Sobic003G382200 Sobic010G152500--Sobic003G382200 Sobic004G009200 Sobic004G009200 Sobic010G152500--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic010G152500--Sobic002G391900 Sobic007G015100 Sobic007G015100 Sobic010G152500--Sobic007G015100 Sobic009G106100 Sobic009G106100 Sobic010G152500--Sobic009G106100 Sobic005G106300 Sobic005G106300 Sobic010G152500--Sobic005G106300 Sobic010G152500--Sobic002G029500 Sobic006G097900 Sobic006G097900 Sobic010G152500--Sobic006G097900 Sobic010G152500--Sobic005G182900 Sobic005G071900--Sobic005G065700 Sobic004G312500 Sobic004G312500 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G071900--Sobic005G110511 Sobic006G108300 Sobic006G108300 Sobic005G071900--Sobic006G108300 Sobic006G009700 Sobic006G009700 Sobic005G071900--Sobic006G009700 Sobic008G138700 Sobic008G138700 Sobic005G071900--Sobic008G138700 Sobic005G071900--Sobic003G079100 Sobic005G071900--Sobic002G029600 Sobic007G090600--Sobic006G031100 Sobic003G282300 Sobic003G282300 Sobic007G090600--Sobic003G282300 Sobic007G090600--Sobic004G322000 Sobic007G090600--Sobic003G215300 Sobic007G090600--Sobic004G014600 Sobic007G090600--Sobic006G196400 Sobic007G090600--Sobic006G205700 Sobic007G090600--Sobic003G240400 Sobic007G090600--Sobic002G115600 Sobic010G096700 Sobic010G096700 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic005G104200 Sobic005G104200 Sobic001G506600--Sobic005G104200 Sobic001G506600--Sobic002G029600 Sobic002G411000 Sobic002G411000 Sobic001G506600--Sobic002G411000 Sobic002G019100 Sobic002G019100 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic006G209000 Sobic006G209000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300
Octagon: transcription factors


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