Gene annotation
Transcriptome id Sobic.003G382200.1
Synonym Sb03g042190
Functional annotation methyltransferase domain containing protein, expressed
UniProt C5XEP4
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF720
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G05390 : -
RAP-DB (Rice) LOC_Os04g36710.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026507
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G152500 glycosyltransferase, putative, expressed -
2 Sobic.002G391900 peroxidase precursor, putative, expressed -
3 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
4 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
5 Sobic.005G216600 plant protein of unknown function domain containing protein, expressed -
6 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
7 Sobic.005G106300 expressed protein -
8 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
9 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
10 Sobic.005G182800 NB-ARC domain containing protein, expressed -
11 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
12 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
13 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
15 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
16 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
18 Sobic.005G069500 OsWAK92 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.010G268700 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic003G382200 Sobic003G382200 Sobic010G152500 Sobic010G152500 Sobic003G382200--Sobic010G152500 Sobic002G391900 Sobic002G391900 Sobic003G382200--Sobic002G391900 Sobic004G009200 Sobic004G009200 Sobic003G382200--Sobic004G009200 Sobic009G106100 Sobic009G106100 Sobic003G382200--Sobic009G106100 Sobic005G216600 Sobic005G216600 Sobic003G382200--Sobic005G216600 Sobic001G274400 Sobic001G274400 Sobic003G382200--Sobic001G274400 Sobic005G106300 Sobic005G106300 Sobic003G382200--Sobic005G106300 Sobic005G182900 Sobic005G182900 Sobic003G382200--Sobic005G182900 Sobic005G197400 Sobic005G197400 Sobic003G382200--Sobic005G197400 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic010G152500--Sobic002G391900 Sobic007G015100 Sobic007G015100 Sobic010G152500--Sobic007G015100 Sobic010G152500--Sobic009G106100 Sobic010G152500--Sobic005G106300 Sobic002G029500 Sobic002G029500 Sobic010G152500--Sobic002G029500 Sobic006G097900 Sobic006G097900 Sobic010G152500--Sobic006G097900 Sobic010G152500--Sobic005G182900 Sobic002G391900--Sobic003G382200 Sobic002G391900--Sobic010G152500 Sobic002G391900--Sobic004G009200 Sobic002G391900--Sobic009G106100 Sobic005G069500 Sobic005G069500 Sobic002G391900--Sobic005G069500 Sobic002G391900--Sobic006G097900 Sobic002G391900--Sobic005G216600 Sobic006G031100 Sobic006G031100 Sobic002G391900--Sobic006G031100 Sobic006G224500 Sobic006G224500 Sobic002G391900--Sobic006G224500 Sobic004G009200--Sobic005G197400 Sobic004G009200--Sobic010G152500 Sobic005G197500 Sobic005G197500 Sobic004G009200--Sobic005G197500 Sobic004G009200--Sobic003G382200 Sobic004G009200--Sobic009G106100 Sobic004G009200--Sobic005G106300 Sobic007G154100 Sobic007G154100 Sobic004G009200--Sobic007G154100 Sobic005G182800 Sobic005G182800 Sobic004G009200--Sobic005G182800 Sobic004G009200--Sobic007G015100 Sobic003G083800 Sobic003G083800 Sobic009G106100--Sobic003G083800 Sobic009G106100--Sobic010G152500 Sobic009G106100--Sobic004G009200 Sobic009G106100--Sobic003G382200 Sobic009G106100--Sobic005G106300 Sobic007G111800 Sobic007G111800 Sobic009G106100--Sobic007G111800 Sobic009G106100--Sobic002G391900 Sobic009G106100--Sobic005G216600 Sobic009G106100--Sobic005G197400 Sobic005G216600--Sobic006G097900 Sobic010G268700 Sobic010G268700 Sobic005G216600--Sobic010G268700 Sobic005G216600--Sobic005G182900 Sobic008G033100 Sobic008G033100 Sobic005G216600--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic005G216600--Sobic010G242800 Sobic003G161400 Sobic003G161400 Sobic005G216600--Sobic003G161400 Sobic005G216600--Sobic005G182800 Sobic001G293100 Sobic001G293100 Sobic005G216600--Sobic001G293100 Sobic004G121600 Sobic004G121600 Sobic005G216600--Sobic004G121600 Sobic004G014600 Sobic004G014600 Sobic001G274400--Sobic004G014600 Sobic009G165100 Sobic009G165100 Sobic001G274400--Sobic009G165100 Sobic001G274400--Sobic010G152500 Sobic004G322000 Sobic004G322000 Sobic001G274400--Sobic004G322000 Sobic001G274400--Sobic003G382200 Sobic007G090600 Sobic007G090600 Sobic001G274400--Sobic007G090600 Sobic002G029600 Sobic002G029600 Sobic001G274400--Sobic002G029600 Sobic001G274400--Sobic006G031100 Sobic006G135300 Sobic006G135300 Sobic001G274400--Sobic006G135300 Sobic005G106300--Sobic002G029500 Sobic005G106300--Sobic005G182900 Sobic005G106300--Sobic010G152500 Sobic005G106300--Sobic004G009200 Sobic005G106300--Sobic001G293100 Sobic007G015000 Sobic007G015000 Sobic005G106300--Sobic007G015000 Sobic005G106300--Sobic007G111800 Sobic005G106300--Sobic007G015100 Sobic001G415100 Sobic001G415100 Sobic005G106300--Sobic001G415100 Sobic005G182900--Sobic008G033100 Sobic002G019000 Sobic002G019000 Sobic005G182900--Sobic002G019000 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic005G182900--Sobic001G415100 Sobic005G065700 Sobic005G065700 Sobic005G182900--Sobic005G065700 Sobic005G182900--Sobic005G182800 Sobic005G182900--Sobic003G161400 Sobic005G182900--Sobic001G293100 Sobic005G197400--Sobic005G197500 Sobic005G197400--Sobic004G009200 Sobic005G066366 Sobic005G066366 Sobic005G197400--Sobic005G066366 Sobic005G197400--Sobic005G182900 Sobic005G197400--Sobic010G242800 Sobic005G197400--Sobic008G033100 Sobic005G197400--Sobic005G216600 Sobic005G197400--Sobic002G019000 Sobic005G110511 Sobic005G110511 Sobic005G197400--Sobic005G110511
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.