Gene annotation
Transcriptome id Sobic.003G079100.2
Synonym Sb03g006670, CYP77A5P
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
muconate cycloisomerase, putative, expressed
UniProt A0A1W0VW52
Pfam PF02746 PF13378
Panther DB PTHR13794 PTHR13794:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G18270 : cytochrome P450, family 77, subfamily A, polypeptide 5 pseudogene
RAP-DB (Rice) LOC_Os01g04630.1 : muconate cycloisomerase, putative, expressed
MaizeGDB (Corn) Zm00025a023532 , Zm00025a036396 , Zm00025a028226 , Zm00025a035588
Brachypodium KQK02595 , KQK02596
Barley HORVU3Hr1G007980.5 , HORVU3Hr1G007980.6 , HORVU3Hr1G007980.1 , HORVU3Hr1G007980.3 , HORVU3Hr1G007980.2 , HORVU3Hr1G007980.4
Wheat TraesCS3A02G050800 , TraesCS3B02G059600 , TraesCS3B02G059700 , TraesCS3B02G059700 , TraesCS3D02G050400 , TraesCS3D02G050300
Populus -


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cDNA sequences
Sobic.003G079100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
2 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
3 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
4 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
5 Sobic.005G182800 NB-ARC domain containing protein, expressed -
6 Sobic.010G213600 histidine kinase, putative, expressed -
7 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
8 Sobic.010G152500 glycosyltransferase, putative, expressed -
9 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
10 Sobic.002G019000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
12 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G108300 expressed protein -
15 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
16 Sobic.003G441601 - -
17 Sobic.001G342000 expressed protein -
18 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
19 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
20 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G079100 Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic003G079100--Sobic002G029600 Sobic004G014600 Sobic004G014600 Sobic003G079100--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic003G079100--Sobic005G065700 Sobic002G029500 Sobic002G029500 Sobic003G079100--Sobic002G029500 Sobic005G182800 Sobic005G182800 Sobic003G079100--Sobic005G182800 Sobic010G213600 Sobic010G213600 Sobic003G079100--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic003G079100--Sobic005G182900 Sobic010G152500 Sobic010G152500 Sobic003G079100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic003G079100--Sobic005G071900 Sobic002G029600--Sobic003G079100 Sobic006G031100 Sobic006G031100 Sobic002G029600--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic002G029600--Sobic003G215300 Sobic002G029600--Sobic004G014600 Sobic002G029600--Sobic005G065700 Sobic002G029600--Sobic010G152500 Sobic002G029600--Sobic005G071900 Sobic007G090600 Sobic007G090600 Sobic002G029600--Sobic007G090600 Sobic001G506600 Sobic001G506600 Sobic002G029600--Sobic001G506600 Sobic003G441601 Sobic003G441601 Sobic004G014600--Sobic003G441601 Sobic004G014600--Sobic007G090600 Sobic009G165100 Sobic009G165100 Sobic004G014600--Sobic009G165100 Sobic004G014600--Sobic005G182800 Sobic004G014600--Sobic003G079100 Sobic004G014600--Sobic010G213600 Sobic004G014600--Sobic005G182900 Sobic004G014600--Sobic006G031100 Sobic002G289500 Sobic002G289500 Sobic004G014600--Sobic002G289500 Sobic002G019000 Sobic002G019000 Sobic005G065700--Sobic002G019000 Sobic005G065700--Sobic005G071900 Sobic005G065700--Sobic005G182900 Sobic005G066500 Sobic005G066500 Sobic005G065700--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G065700--Sobic005G110511 Sobic005G065700--Sobic010G213600 Sobic005G065700--Sobic003G079100 Sobic008G033100 Sobic008G033100 Sobic005G065700--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic005G065700--Sobic010G242800 Sobic002G029500--Sobic005G182900 Sobic007G064900 Sobic007G064900 Sobic002G029500--Sobic007G064900 Sobic005G097900 Sobic005G097900 Sobic002G029500--Sobic005G097900 Sobic005G106300 Sobic005G106300 Sobic002G029500--Sobic005G106300 Sobic002G029500--Sobic008G033100 Sobic002G029500--Sobic002G289500 Sobic001G415100 Sobic001G415100 Sobic002G029500--Sobic001G415100 Sobic007G015000 Sobic007G015000 Sobic002G029500--Sobic007G015000 Sobic002G082000 Sobic002G082000 Sobic002G029500--Sobic002G082000 Sobic005G182800--Sobic005G182900 Sobic005G182800--Sobic004G014600 Sobic005G182800--Sobic003G079100 Sobic008G138900 Sobic008G138900 Sobic005G182800--Sobic008G138900 Sobic005G182800--Sobic006G031100 Sobic005G182800--Sobic002G019000 Sobic005G216600 Sobic005G216600 Sobic005G182800--Sobic005G216600 Sobic004G009200 Sobic004G009200 Sobic005G182800--Sobic004G009200 Sobic005G182800--Sobic005G065700 Sobic010G213600--Sobic008G033100 Sobic010G213600--Sobic005G065700 Sobic010G213600--Sobic002G019000 Sobic010G213600--Sobic004G014600 Sobic010G213600--Sobic005G182900 Sobic010G213600--Sobic009G165100 Sobic010G213600--Sobic003G079100 Sobic003G161400 Sobic003G161400 Sobic010G213600--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic010G213600--Sobic001G342000 Sobic005G182900--Sobic008G033100 Sobic005G182900--Sobic002G019000 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic005G182900--Sobic001G415100 Sobic005G182900--Sobic005G065700 Sobic005G182900--Sobic005G182800 Sobic005G182900--Sobic003G161400 Sobic001G293100 Sobic001G293100 Sobic005G182900--Sobic001G293100 Sobic003G382200 Sobic003G382200 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic010G152500--Sobic002G391900 Sobic007G015100 Sobic007G015100 Sobic010G152500--Sobic007G015100 Sobic009G106100 Sobic009G106100 Sobic010G152500--Sobic009G106100 Sobic010G152500--Sobic005G106300 Sobic010G152500--Sobic002G029500 Sobic006G097900 Sobic006G097900 Sobic010G152500--Sobic006G097900 Sobic010G152500--Sobic005G182900 Sobic005G071900--Sobic005G065700 Sobic004G312500 Sobic004G312500 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G071900--Sobic005G110511 Sobic006G108300 Sobic006G108300 Sobic005G071900--Sobic006G108300 Sobic006G009700 Sobic006G009700 Sobic005G071900--Sobic006G009700 Sobic008G138700 Sobic008G138700 Sobic005G071900--Sobic008G138700 Sobic005G071900--Sobic003G079100 Sobic005G071900--Sobic002G029600
Octagon: transcription factors


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