Gene annotation
Transcriptome id Sobic.003G441601.1
Synonym -
Functional annotation -
UniProt A0A1W0W1M4
Pfam PF06830
Panther DB PTHR31656 PTHR31656:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19430 : late embryogenesis abundant protein-related / LEA protein-related
RAP-DB (Rice) LOC_Os01g73730.1 : RCLEA5 - Root cap and Late embryogenesis related family protein precursor, expressed
MaizeGDB (Corn) Zm00025a011534 , Zm00025a052221 , Zm00025a033481 , Zm00025a040983 , Zm00025a002979 , Zm00025a025854 , Zm00025a029575 , Zm00025a039058 , Zm00025a025852 , Zm00025a025851
Brachypodium KQK11723 , KQJ92264 , KQJ92269 , KQK09956
Barley HORVU3Hr1G075070.1 , HORVU3Hr1G113530.6 , HORVU3Hr1G113530.4 , HORVU3Hr1G113530.5 , HORVU3Hr1G113530.2 , HORVU3Hr1G113530.3 , HORVU3Hr1G113530.1 , HORVU1Hr1G002950.3 , HORVU1Hr1G002950.2 , HORVU1Hr1G002950.1
Wheat TraesCSU02G059100 , TraesCS3D02G306100 , TraesCS3B02G587300 , TraesCS1D02G022800 , TraesCS1A02G023300 , TraesCS3D02G526100 , TraesCS3B02G340500 , TraesCS7D02G064700 , TraesCS3A02G519700 , TraesCS3A02G296600 , TraesCS3A02G518800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G391300 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.005G046400 - -
3 Sobic.002G111900 receptor-like kinase, putative, expressed -
4 Sobic.006G171100 expansin precursor, putative, expressed -
5 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
6 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
7 Sobic.002G289500 carbohydrate binding protein, putative, expressed -
8 Sobic.010G191700 cytochrome P450, putative, expressed -
9 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
10 Sobic.009G136800 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
12 Sobic.010G241900 Leucine-rich receptor-like protein kinase family protein(PubMedID : 28640841)@serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
13 Sobic.009G165100 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.001G415100 terpene synthase, putative, expressed -
15 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
16 Sobic.002G063700 NB-ARC domain containing protein, expressed -
17 Sobic.010G128300 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.009G065700 - -
20 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family


Gene co-expression network
sample Sobic003G441601 Sobic003G441601 Sobic002G391300 Sobic002G391300 Sobic003G441601--Sobic002G391300 Sobic005G046400 Sobic005G046400 Sobic003G441601--Sobic005G046400 Sobic002G111900 Sobic002G111900 Sobic003G441601--Sobic002G111900 Sobic006G171100 Sobic006G171100 Sobic003G441601--Sobic006G171100 Sobic010G010000 Sobic010G010000 Sobic003G441601--Sobic010G010000 Sobic003G441800 Sobic003G441800 Sobic003G441601--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic003G441601--Sobic002G289500 Sobic010G191700 Sobic010G191700 Sobic003G441601--Sobic010G191700 Sobic004G014600 Sobic004G014600 Sobic003G441601--Sobic004G014600 Sobic002G391300--Sobic003G441601 Sobic002G391300--Sobic002G111900 Sobic002G391300--Sobic010G191700 Sobic010G241900 Sobic010G241900 Sobic002G391300--Sobic010G241900 Sobic002G391300--Sobic006G171100 Sobic010G128300 Sobic010G128300 Sobic002G391300--Sobic010G128300 Sobic005G134200 Sobic005G134200 Sobic002G391300--Sobic005G134200 Sobic002G391300--Sobic002G289500 Sobic009G136800 Sobic009G136800 Sobic002G391300--Sobic009G136800 Sobic005G046400--Sobic003G441601 Sobic005G046400--Sobic003G441800 Sobic005G046400--Sobic002G391300 Sobic005G046400--Sobic006G171100 Sobic005G046400--Sobic002G111900 Sobic005G046400--Sobic010G191700 Sobic006G205700 Sobic006G205700 Sobic005G046400--Sobic006G205700 Sobic005G046400--Sobic010G241900 Sobic005G046400--Sobic009G136800 Sobic002G111900--Sobic010G191700 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic002G111900--Sobic006G171100 Sobic002G111900--Sobic005G046400 Sobic006G059800 Sobic006G059800 Sobic002G111900--Sobic006G059800 Sobic006G171100--Sobic009G136800 Sobic006G171100--Sobic002G391300 Sobic006G171100--Sobic010G010000 Sobic006G171100--Sobic003G441601 Sobic006G171100--Sobic002G111900 Sobic006G171100--Sobic005G046400 Sobic006G171100--Sobic002G289500 Sobic005G226400 Sobic005G226400 Sobic006G171100--Sobic005G226400 Sobic006G047200 Sobic006G047200 Sobic006G171100--Sobic006G047200 Sobic010G010000--Sobic006G171100 Sobic010G010000--Sobic002G111900 Sobic010G010000--Sobic003G441601 Sobic010G010000--Sobic002G391300 Sobic010G010000--Sobic009G136800 Sobic009G055300 Sobic009G055300 Sobic010G010000--Sobic009G055300 Sobic010G010000--Sobic002G289500 Sobic010G010000--Sobic005G226400 Sobic002G063700 Sobic002G063700 Sobic010G010000--Sobic002G063700 Sobic003G053200 Sobic003G053200 Sobic003G441800--Sobic003G053200 Sobic003G441700 Sobic003G441700 Sobic003G441800--Sobic003G441700 Sobic003G441800--Sobic003G441601 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic004G121600 Sobic004G121600 Sobic003G441800--Sobic004G121600 Sobic005G119900 Sobic005G119900 Sobic003G441800--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic002G289500--Sobic002G391300 Sobic001G415100 Sobic001G415100 Sobic002G289500--Sobic001G415100 Sobic002G289500--Sobic003G441601 Sobic002G289500--Sobic006G171100 Sobic001G153100 Sobic001G153100 Sobic002G289500--Sobic001G153100 Sobic002G289500--Sobic009G136800 Sobic002G029500 Sobic002G029500 Sobic002G289500--Sobic002G029500 Sobic006G230100 Sobic006G230100 Sobic002G289500--Sobic006G230100 Sobic002G289500--Sobic002G063700 Sobic010G191700--Sobic010G241900 Sobic010G191700--Sobic002G111900 Sobic010G191700--Sobic007G220400 Sobic010G191700--Sobic002G391300 Sobic010G191700--Sobic010G128300 Sobic002G391400 Sobic002G391400 Sobic010G191700--Sobic002G391400 Sobic010G191700--Sobic003G441601 Sobic007G206800 Sobic007G206800 Sobic010G191700--Sobic007G206800 Sobic010G191700--Sobic005G134200 Sobic004G014600--Sobic003G441601 Sobic007G090600 Sobic007G090600 Sobic004G014600--Sobic007G090600 Sobic009G165100 Sobic009G165100 Sobic004G014600--Sobic009G165100 Sobic005G182800 Sobic005G182800 Sobic004G014600--Sobic005G182800 Sobic003G079100 Sobic003G079100 Sobic004G014600--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic004G014600--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic004G014600--Sobic005G182900 Sobic006G031100 Sobic006G031100 Sobic004G014600--Sobic006G031100 Sobic004G014600--Sobic002G289500
Octagon: transcription factors


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